info icon

This is a non-core endpoint: only basic statistics are computed.

See these related core endpoints for full statistics:

Other specified diseases of spinal cord, drug-induced

OTHER_SPECIFE_DISEA_SPINAL_CORD

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ATC codes for adverse effects of Drugs ANY
  • Hospital discharge: ICD-10 G95.8#

1 out of 7 registries used, show all original rules.

26

4. Check minimum number of events

None

26

5. Include endpoints

None

26

6. Filter based on genotype QC (FinnGen only)

26

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
C
First used in FinnGen datafreeze
DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded (not available in FinRegistry).

-FinnGen-

Key figures

All Female Male
Number of individuals 26 10 16
Unadjusted period prevalence (%) 0.01 0.00 0.01
Median age at first event (years) 46.77 42.59 49.38

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3026008) Bacteria identified in Urine by Culture
17
66
5.51
4.23
16.5
3.3
—
—
—
0
0
(40764999) Glomerular filtration rate/1.73 sq M.predicted [Volume Rate/Area] in Serum, Plasma or Blood by Creatinine-based formula (CKD-EPI)
14
212
0.26
2.65
27.1
14.1
ml/min/173m2
97.0
80.3
—
8
175
(3007853) Bacteria identified in Skin by Aerobe culture
8
24
4.34
2.42
7.0
2.4
—
—
—
0
0
(3010813) Leukocytes [#/volume] in Blood
20
246
0.19
2.30
37.6
23.6
e9/l
7.6
6.6
0.92
20
238
(3007461) Platelets [#/volume] in Blood
20
246
0.19
2.30
37.4
23.4
e9/l
289.3
245.5
2.31
20
238
(3026361) Erythrocytes [#/volume] in Blood
20
246
0.19
2.30
37.5
23.3
e12/l
4.4
4.5
0.40
20
238
(3021614) Rheumatoid factor [Units/volume] in Serum or Plasma
0
43
0.00
1.72
0.0
1.2
—
22.3
—
0
12
(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma
0
43
0.00
1.72
0.0
9.3
—
—
—
0
0
(3051552) Clostridioides difficile toxin genes [Presence] in Stool by NAA with probe detection
6
20
3.58
1.69
1.5
1.4
—
—
—
0
0
(3006923) Alanine aminotransferase [Enzymatic activity/volume] in Serum or Plasma
20
239
0.29
1.61
11.3
10.9
u/l
25.5
26.3
0.11
20
231
(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma
17
220
0.35
1.61
3.3
4.6
mmol/l
1.4
1.4
0.08
17
203
(3041096) Erythrocytes [Presence] in Urine by Automated
12
64
2.63
1.49
12.3
3.9
—
—
—
0
0
(3041942) Cyclic citrullinated peptide Ab [Units/volume] in Serum
0
41
0.00
1.47
0.0
1.3
—
1.1
—
0
13
(3020564) Creatinine [Moles/volume] in Serum or Plasma
20
237
0.33
1.46
30.8
18.2
umol/l
61.3
81.0
2.83
20
237
(3001308) Cholesterol in LDL [Moles/volume] in Serum or Plasma
18
225
0.35
1.43
4.8
5.2
mmol/l
3.0
2.7
0.75
18
208
(3019060) Gas panel - Arterial blood
5
18
3.18
1.35
3.0
3.9
—
—
—
0
0
(3023103) Potassium [Moles/volume] in Serum or Plasma
20
235
0.36
1.33
28.6
16.9
mmol/l
3.9
4.0
0.37
20
230
(42868674) Cholesterol in HDL/Cholesterol.total [Molar ratio] in Serum or Plasma
0
33
0.00
1.27
0.0
5.5
—
31.0
—
0
20
(3023368) Bacteria identified in Blood by Culture
11
62
2.34
1.17
8.1
5.1
—
—
—
0
0
(43054914) Glucose tolerance 2 hours panel - Serum or Plasma
5
21
2.70
1.14
1.2
1.6
—
—
—
0
0
(3018251) Fasting glucose [Moles/volume] in Serum or Plasma
19
223
0.45
1.03
3.9
4.5
mmol/l
5.8
5.9
0.30
19
205
(3022145) Colonoscopy Study observation
0
32
0.00
1.03
0.0
1.3
—
—
—
0
0
(3019900) Cholesterol [Moles/volume] in Serum or Plasma
18
219
0.42
1.02
3.2
4.7
mmol/l
4.8
4.5
0.35
18
203
(3013115) Eosinophils [#/volume] in Blood
7
116
0.46
1.01
10.9
7.1
e9/l
0.2
0.2
—
7
97
(3013650) Neutrophils [#/volume] in Blood by Automated count
9
138
0.47
1.01
5.9
11.2
e9/l
6.3
4.2
—
9
113
(3044889) 12 lead EKG panel
12
166
0.49
0.93
3.3
4.2
—
—
—
0
0
(3015736) pH of Urine
14
94
2.06
0.93
5.6
4.0
—
—
—
0
0
(3000850) Epithelial cells [#/volume] in Urine
10
59
2.13
0.92
3.6
2.8
e6/l
4.9
4.1
—
10
54
(3042936) Bacteria identified in Isolate by Culture
6
31
2.21
0.91
6.7
2.5
—
—
—
0
0
(3015399) Transferrin receptor.soluble [Mass/volume] in Serum or Plasma
9
53
2.06
0.88
1.6
2.0
mg/l
2.5
2.8
—
9
47
(40761511) CBC panel - Blood by Automated count
20
228
0.47
0.88
30.8
15.4
—
—
—
0
0
(3021589) Normoblasts [#/volume] in Blood
6
99
0.49
0.85
17.3
11.3
e9/l
0.0
0.0
—
6
76
(3019198) Lymphocytes [#/volume] in Blood
7
111
0.50
0.84
6.3
7.0
e9/l
2.0
1.8
—
7
96
(40761535) Cells panel - Urine sediment
0
27
0.00
0.82
0.0
3.4
—
—
—
0
0
(40768804) Tissue Pathology biopsy report
5
84
0.50
0.72
1.6
2.0
—
—
—
0
0
(3026782) Osmolality of Urine
8
49
1.91
0.71
3.0
3.2
mosm/kgh2o
567.8
537.0
—
8
44
(3001604) Monocytes [#/volume] in Blood
7
108
0.52
0.68
6.3
6.6
e9/l
0.9
0.6
—
7
90
(3006315) Basophils [#/volume] in Blood
7
108
0.52
0.68
6.3
6.8
e9/l
0.0
0.0
—
7
91
(3002030) Lymphocytes/100 leukocytes in Blood
7
107
0.53
0.68
6.1
6.3
%
24.8
26.5
—
7
101
(3019069) Monocytes/100 leukocytes in Blood
7
106
0.54
0.68
6.1
6.8
%
8.8
9.1
—
7
100
(3006504) Eosinophils/100 leukocytes in Blood
7
105
0.54
0.68
6.1
6.2
%
2.1
2.6
—
7
99
(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection
5
29
1.89
0.67
1.8
1.6
—
—
—
0
0
(3017181) Myelocytes/100 leukocytes in Blood
0
20
0.00
0.63
0.0
3.4
—
1.6
—
0
7
(3014007) Fractional oxyhemoglobin in Arterial blood
0
19
0.00
0.63
0.0
7.3
—
95.0
—
0
19
(3002109) Cholesterol in LDL/Cholesterol in HDL [Mass Ratio] in Serum or Plasma
0
21
0.00
0.63
0.0
2.0
—
—
—
0
0
(3019225) pH of Specimen
0
22
0.00
0.62
0.0
3.5
—
—
—
0
0
(4010399)
0
23
0.00
0.61
0.0
1.5
—
—
—
0
0
(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection
6
39
1.70
0.57
1.8
1.7
—
—
—
0
0
(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip
13
96
1.71
0.56
12.2
4.4
—
—
—
0
0
(3022096) Basophils/100 leukocytes in Blood
7
100
0.59
0.53
6.1
6.7
%
0.6
0.7
—
7
94
(3016431) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Serum or Plasma
15
117
1.67
0.52
5.8
6.9
mmol/l
1.2
1.2
—
9
103
(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection
5
30
1.82
0.47
1.4
1.8
—
—
—
0
0
(3013707) Erythrocyte sedimentation rate by Westergren method
14
169
0.63
0.44
6.3
4.1
mm/h
14.7
12.4
0.22
14
158
(3003510) Neisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection
0
15
0.00
0.43
0.0
1.6
—
—
—
0
0
(3004529) Oxygen [Partial pressure] adjusted to patient's actual temperature in Venous blood
0
16
0.00
0.42
0.0
4.0
—
45.5
—
0
16
(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection
0
16
0.00
0.42
0.0
1.8
—
—
—
0
0
(3016888) Borrelia burgdorferi IgG Ab [Units/volume] in Serum
0
16
0.00
0.42
0.0
1.1
—
—
—
0
0
(4035726)
0
16
0.00
0.42
0.0
1.2
—
—
—
0
0
(3016251) Hemoglobin.gastrointestinal [Presence] in Stool
0
17
0.00
0.42
0.0
2.1
—
—
—
0
0
(3004119) Hemoglobin [Mass/volume] in Venous blood
0
18
0.00
0.41
0.0
3.6
—
125.2
—
0
18
(3008230) Borrelia burgdorferi IgM Ab [Units/volume] in Serum
0
18
0.00
0.41
0.0
1.9
—
—
—
0
0
(3037467) Urinalysis macro (dipstick) panel - Urine
18
157
1.47
0.39
16.8
4.8
—
—
—
0
0
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
9
115
0.67
0.39
4.0
3.5
—
—
—
0
0
(3002582) Erythrocytes [#/volume] in Urine
10
75
1.54
0.37
6.3
3.6
e6/l
26.0
18.7
—
10
59
(3009035) Cobalamin (Vitamin B12) [Moles/volume] in Serum or Plasma
6
45
1.43
0.37
1.3
1.6
pmol/l
332.5
527.9
—
6
39
(3029287) Urinalysis microscopic panel [#/volume] - Urine by Automated count
11
85
1.51
0.36
4.9
3.7
—
—
—
0
0
(3009508) Creatinine [Moles/volume] in Urine
5
72
0.62
0.31
2.0
3.0
mmol/l
6.9
8.3
—
5
64
(3044640) Blood type and Crossmatch panel - Blood
5
70
0.65
0.31
3.2
2.3
—
—
—
0
0
(36304419) Bacteria [Presence] in Urine
9
71
1.41
0.31
6.1
3.3
—
—
—
0
0
(36031861) Influenza virus A and B and SARS-CoV-2 (COVID-19) and Respiratory syncytial virus RNA panel - Respiratory system specimen by NAA with probe detection
0
11
0.00
0.22
0.0
1.4
—
—
—
0
0
(3008898) HLA-B27 [Presence]
0
10
0.00
0.22
0.0
1.0
—
—
—
0
0
(1761482) Bacteria [#/volume] in Urine by Culture
0
10
0.00
0.22
0.0
5.6
—
—
—
0
0
(3046870) Tissue transglutaminase IgG Ab [Units/volume] in Serum
0
10
0.00
0.22
0.0
1.0
—
—
—
0
0
(40768800) Prostate Pathology biopsy report
0
10
0.00
0.22
0.0
1.1
—
—
—
0
0
(4034850)
0
10
0.00
0.22
0.0
14.8
—
—
—
0
0
(3020891) Body temperature
0
10
0.00
0.22
0.0
4.6
—
—
—
0
0
(3019832) Treponema pallidum Ab [Presence] in Serum
0
12
0.00
0.21
0.0
1.9
—
—
—
0
0
(3027238) Thyroperoxidase Ab [Units/volume] in Serum or Plasma
0
12
0.00
0.21
0.0
1.0
—
122.4
—
0
6
(3044491) Cholesterol non HDL [Mass/volume] in Serum or Plasma
0
12
0.00
0.21
0.0
1.6
—
—
—
0
0
(3010517) Carboxyhemoglobin/Hemoglobin.total in Venous blood
0
14
0.00
0.20
0.0
3.6
—
1.1
—
0
14
(3024889) Methemoglobin/Hemoglobin.total in Venous blood
0
14
0.00
0.20
0.0
3.6
—
0.8
—
0
14
(3027273) Bicarbonate [Moles/volume] in Venous blood
0
14
0.00
0.20
0.0
3.6
—
24.0
—
0
14
(3000330) Specific gravity of Urine by Test strip
0
14
0.00
0.20
0.0
4.8
—
—
—
0
0
(42870588) Differential panel, method unspecified - Blood
5
68
0.67
0.20
3.4
5.9
—
—
—
0
0
(3015377) Calcium [Moles/volume] in Serum or Plasma
7
86
0.75
0.18
1.9
2.6
mmol/l
2.3
2.3
—
7
73
(3018095) Leukocytes [#/volume] in Urine
10
88
1.22
0.10
6.5
4.0
e6/l
280.0
21.6
—
10
64
(3030467) Casts [#/volume] in Urine by Automated count
6
72
0.78
0.09
6.3
3.4
e6/l
0.0
0.3
—
6
55
(3009542) Hematocrit [Volume Fraction] of Blood
18
186
0.90
0.09
32.4
17.1
%
32.1
40.2
—
7
131
(706163) SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection
13
127
1.05
0.00
2.9
3.1
—
—
—
0
0
(3028300) Cannabinoids [Presence] in Urine
0
6
0.00
0.00
0.0
2.0
—
—
—
0
0
(3052851) Hemolysis interference index of Serum or Plasma
0
6
0.00
0.00
0.0
2.7
—
—
—
0
0
(3003338) MCHC [Mass/volume]
18
178
1.04
0.00
36.1
21.7
g/l
330.6
332.9
0.37
18
178
(3027944) Amphetamines [Presence] in Urine
0
6
0.00
0.00
0.0
2.0
—
—
—
0
0
(3043109) Cytology report of Tissue fine needle aspirate Cyto stain
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3027008) Opiates [Presence] in Urine
0
6
0.00
0.00
0.0
2.0
—
—
—
0
0
(3010521) Mycoplasma pneumoniae IgM Ab [Presence] in Serum by Immunoassay
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3050380) Cytology report of Cervical or vaginal smear or scraping Cyto stain
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
(3013290) Carbon dioxide [Partial pressure] in Blood
0
6
0.00
0.00
0.0
3.5
—
5.6
—
0
6
(3016879) Cocaine [Presence] in Urine
0
6
0.00
0.00
0.0
2.0
—
—
—
0
0
(3031478) Chlamydophila pneumoniae DNA [Presence] in Specimen by NAA with probe detection
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
(3027315) Oxygen [Partial pressure] in Blood
0
6
0.00
0.00
0.0
3.5
—
8.4
—
0
6
(3012220) Varicella zoster virus IgM Ab [Presence] in Serum by Immunoassay
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3010421) pH of Blood
0
6
0.00
0.00
0.0
3.7
—
7.4
—
0
6
(3036489) Thrombin time
0
6
0.00
0.00
0.0
1.5
—
18.8
—
0
6
(3024928) Oxygen saturation in Venous blood
0
5
0.00
0.00
0.0
3.4
—
—
—
0
0
(3012477) Bordetella pertussis DNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
1.7
—
—
—
0
0
(3014162) Mycobacterium tuberculosis DNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
3.3
—
—
—
0
0
(3029511) Human papilloma virus DNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3014765) Yersinia sp identified in Stool by Organism specific culture
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3006588) Cancer Ag 15-3 [Units/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
3.4
—
19.7
—
0
7
(3028271) Lactate [Moles/volume] in Capillary blood
0
5
0.00
0.00
0.0
1.4
—
1.2
—
0
5
(42529201) Cancer Ag 19-9 [Units/volume] in Serum or Plasma by Immunoassay
0
5
0.00
0.00
0.0
4.6
—
4483.4
—
0
5
(3000515) Antithrombin actual/normal in Platelet poor plasma by Chromogenic method
0
5
0.00
0.00
0.0
1.2
—
83.0
—
0
5
(3021584) Pregnancy associated plasma protein A [Units/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
(36305247) Microscopic observation [Identifier] in Isolate by Gram stain
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
(1001926) Buprenorphine [Presence] in Urine by Screen method
0
5
0.00
0.00
0.0
3.2
—
—
—
0
0
(3036086) Jo-1 extractable nuclear Ab [Units/volume] in Serum by Immunoassay
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
(1002224) Polysomnography panel
0
9
0.00
0.00
0.0
1.0
—
—
—
0
0
(3035285) Chloride [Moles/volume] in Venous blood
0
5
0.00
0.00
0.0
3.4
—
108.8
—
0
5
(3003327) Ova and parasites identified in Stool by Light microscopy
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
(42529406) Shigella sp [Presence] in Stool by Culture
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3045414) Leukocytes [Presence] in Urine
0
9
0.00
0.00
0.0
1.9
—
—
—
0
0
(3033705) Calcium.ionized [Moles/volume] in Venous blood
0
5
0.00
0.00
0.0
3.4
—
—
—
0
0
(3014148) Varicella zoster virus Ab [Titer] in Serum
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3014051) Protein [Presence] in Urine by Test strip
0
5
0.00
0.00
0.0
2.2
—
—
—
0
0
(3030692) Respiratory virus DNA+RNA [Identifier] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(3004383) Neutrophil cytoplasmic Ab.classic [Titer] in Serum by Immunofluorescence
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(44816559) Phosphatidylethanol [Mass/volume] in Blood
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3019309) Folate [Moles/volume] in Red Blood Cells
5
48
1.05
0.00
1.0
1.5
nmol/l
1458.4
1237.7
—
5
38
(3006418) Campylobacter sp identified in Tissue by Organism specific culture
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3024403) Complement+Immunoglobulin [Units/volume] in Red Blood Cells
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
(3039162) Centromere protein B Ab [Units/volume] in Serum
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3004716) Salmonella sp identified in Stool by Organism specific culture
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(40765161) Human bocavirus DNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(46235759) Influenza virus B RNA [Presence] in Nasopharynx by NAA with probe detection
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
(3016881) Enterovirus RNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3020565) Legionella pneumophila DNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
(3027544) Mycobacterium sp identified in Sputum by Organism specific culture
0
5
0.00
0.00
0.0
3.6
—
—
—
0
0
(3011371) Neisseria gonorrhoeae DNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
2.0
—
—
—
0
0
(3041354) Potassium [Moles/volume] in Venous blood
0
5
0.00
0.00
0.0
3.4
—
4.0
—
0
5
(3000764) Benzodiazepines [Presence] in Urine
0
5
0.00
0.00
0.0
2.2
—
—
—
0
0
(3021788) Differential panel - Synovial fluid
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(4094501)
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(3002482) Mycoplasma pneumoniae DNA [Presence] in Specimen by NAA with probe detection
0
8
0.00
-0.00
0.0
1.6
—
—
—
0
0
(3042194) Human metapneumovirus RNA [Presence] in Specimen by NAA with probe detection
0
8
0.00
-0.00
0.0
1.8
—
—
—
0
0
(3002434) Lupus erythematosus deoxynucleoproteins IgG Ab [Units/volume] in Serum by Immunoassay
0
8
0.00
-0.00
0.0
1.4
—
—
—
0
0
(3040853) Adenovirus DNA [Identifier] in Specimen by NAA with probe detection
0
8
0.00
-0.00
0.0
1.8
—
—
—
0
0
(3023150) Myeloperoxidase Ab [Units/volume] in Serum
0
8
0.00
-0.00
0.0
2.3
—
—
—
0
0
(3044254) Respiratory syncytial virus RNA [Presence] in Specimen by NAA with probe detection
0
8
0.00
-0.00
0.0
1.4
—
—
—
0
0
(3039443) Prostate specific Ag panel - Serum or Plasma
0
8
0.00
-0.00
0.0
1.9
—
—
—
0
0
(3008037) Lactate [Moles/volume] in Venous blood
0
8
0.00
-0.00
0.0
3.5
—
1.4
—
0
8
(3038515) Glucose [Moles/volume] in Venous blood
0
8
0.00
-0.00
0.0
3.5
—
6.9
—
0
8

Mortality – FinRegistry

This endpoint is excluded (not available in FinRegistry).

Relationships between endpoints

Index endpoint: OTHER_SPECIFE_DISEA_SPINAL_CORD – Other specified diseases of spinal cord, drug-induced

GWS hits: -

This endpoint is excluded (not available in FinRegistry).