Other and unspecified disorders of autonomic nervous system

G6_AUTOTHUNS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 G90.8, G90.9
  • Hospital discharge: ICD-9 337[1-9]
  • Cause of death: ICD-10 G90.8, G90.9
  • Cause of death: ICD-9 337[1-9]

2 out of 7 registries used, show all original rules.

137

4. Check minimum number of events

None

137

5. Include endpoints

None

137

6. Filter based on genotype QC (FinnGen only)

137

Control definitions (FinnGen only)

Control exclude
G6_AUTONOM

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1130 550 569
Only index persons 923 477 446
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.02
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 50.73 48.91 52.18
Only index persons 48.28 47.06 49.57

-FinnGen-

Key figures

All Female Male
Number of individuals 137 80 57
Unadjusted period prevalence (%) 0.03 0.03 0.03
Median age at first event (years) 48.53 46.05 52.01

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
110
Matched controls
1102
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
G90.9
ICD-10 Finland
Disorder of autonomic nervous system, unspecified
+∞
63.9
55
*
G90.8
ICD-10 Finland
Other disorders of autonomic nervous system
+∞
46.1
41
*
3378X
ICD-9 Finland
Disorders of the autonomic nervous system[NEUROPATHIA AUTONOMICA PERIPHERICA ALIA DEFINITA]
+∞
9.5
9
*
N03AX16
ATC
pregabalin; oral
4.2
9.4
41
136
R53
ICD-10 Finland
Malaise and fatigue
3.9
8.2
38
131
Z01.8
ICD-10 Finland
Other specified special examinations
3.7
7.2
35
124
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
4.1
6.4
25
73
K58.9
ICD-10 Finland
Irritable bowel syndrome without diarrhoea
19.4
6.4
9
5
N06AX21
ATC
duloxetine; oral
4.7
6.3
21
52
JN3AA
NOMESCO Finland
Abdominal X-ray examination without contrast
8.5
6.3
13
17
G90.0
ICD-10 Finland
Idiopathic peripheral autonomic neuropathy
+∞
6.3
6
*
SHB00
NOMESCO Finland
Prepation and fitting of bite rail to mouth
4.3
6.1
22
60
I20.90
ICD-10 Finland
Angina pectoris, unspecified
16.2
6.0
9
6
U09.9
ICD-10 Finland
Post COVID-19 condition, unspecified
16.2
6.0
9
6

Mortality – FinRegistry

Association

Association between endpoint G6_AUTOTHUNS and mortality.

Females

Parameter HR [95% CI] p-value
G6_AUTOTHUNS 2.676 [1.8, 3.98] < 0.001
Birth year 0.995 [0.99, 1.0] 0.258

During the follow-up period (1.1.1998 — 31.12.2019), 87 out of 362 females with G6_AUTOTHUNS died.

Males

Parameter HR [95% CI] p-value
G6_AUTOTHUNS 2.681 [2.0, 3.6] < 0.001
Birth year 0.986 [0.98, 1.0] 0.004

During the follow-up period (1.1.1998 — 31.12.2019), 159 out of 402 males with G6_AUTOTHUNS died.

Mortality risk

Mortality risk for people of age

years, who have G6_AUTOTHUNS.

N-year risk Females Males
1 0.252% 0.419%
5 1.563% 3.014%
10 3.867% 7.291%
15 7.165% 13.851%
20 12.414% 22.741%

Relationships between endpoints

Index endpoint: G6_AUTOTHUNS – Other and unspecified disorders of autonomic nervous system

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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