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This is a non-core endpoint: only basic statistics are computed.

See these related core endpoints for full statistics:

Autonomic dysreflexia

G6_AUTODYS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 G90.4
  • Cause of death: ICD-10 G90.4

2 out of 7 registries used, show all original rules.

14

4. Check minimum number of events

None

14

5. Include endpoints

None

14

6. Filter based on genotype QC (FinnGen only)

14

Control definitions (FinnGen only)

Control exclude
G6_AUTONOM

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
G90

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 53 28 25
Only index persons 53 28 25
Unadjusted period prevalence (%)
Whole population 0.00 0.00 0.00
Only index persons 0.00 0.00 0.00
Median age at first event (years)
Whole population - 48.59 54.84
Only index persons 51.54 48.59 54.84

-FinnGen-

Key figures

All Female Male
Number of individuals 14 11 -
Unadjusted period prevalence (%) 0.00 0.00 -
Median age at first event (years) 52.36 48.55 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3017766) Complement C4 [Mass/volume] in Serum or Plasma
6
6
16.06
3.91
1.3
1.0
g/l
0.2
0.2
—
6
6
(3000620) Complement C3 [Mass/volume] in Serum or Plasma
6
6
16.06
3.91
1.3
1.0
g/l
1.3
1.3
—
6
6
(42870588) Differential panel, method unspecified - Blood
9
27
7.40
3.15
6.1
6.3
—
—
—
0
0
(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture
6
10
9.48
3.05
4.8
4.2
—
—
—
0
0
(3033658) Prothrombin time (PT) actual/Normal
8
23
6.66
2.84
4.1
4.0
%
95.9
99.6
—
8
23
(3022948) Iron [Moles/volume] in Serum or Plasma
7
18
6.65
2.68
2.6
2.9
umol/l
14.1
12.0
—
7
18
(3026782) Osmolality of Urine
8
26
5.76
2.53
14.8
2.0
mosm/kgh2o
462.1
523.3
—
8
21
(3042936) Bacteria identified in Isolate by Culture
6
14
6.61
2.46
2.0
1.4
—
—
—
0
0
(40758558) Short blood count panel - Blood
7
21
5.57
2.35
9.7
4.9
—
—
—
0
0
(3030467) Casts [#/volume] in Urine by Automated count
8
28
5.26
2.35
13.2
2.3
e6/l
0.3
0.3
—
8
20
(3029879) Epithelial cells.squamous [#/volume] in Urine by Automated count
5
10
7.06
2.28
22.4
2.4
e6/l
5.4
0.7
—
5
5
(36304419) Bacteria [Presence] in Urine
8
29
5.03
2.26
13.0
2.2
—
—
—
0
0
(3026008) Bacteria identified in Urine by Culture
8
31
4.63
2.10
17.1
2.2
—
—
—
0
0
(3002582) Erythrocytes [#/volume] in Urine
8
32
4.45
2.02
20.9
2.4
e6/l
13.9
121.2
—
8
24
(40768797) Stomach Pathology biopsy report
5
16
4.25
1.59
2.0
1.4
—
—
—
0
0
(3029287) Urinalysis microscopic panel [#/volume] - Urine by Automated count
8
37
3.67
1.56
21.1
2.8
—
—
—
0
0
(3018095) Leukocytes [#/volume] in Urine
8
37
3.67
1.56
32.1
3.1
e6/l
53.6
42.9
—
8
24
(46235355) HIV 1 and 2 tests - Meaningful Use set
6
28
2.97
1.08
1.7
1.7
—
—
—
0
0
(3023368) Bacteria identified in Blood by Culture
6
29
2.85
1.05
11.7
4.0
—
—
—
0
0
(40760892) CBC W Ordered Manual Differential panel - Blood
6
29
2.85
1.05
3.7
8.1
—
—
—
0
0
(3009201) Thyrotropin [Units/volume] in Serum or Plasma
14
113
+∞
0.88
5.6
4.2
mu/l
1.3
1.9
1.50
14
103
(3015736) pH of Urine
8
51
2.31
0.81
4.5
2.6
—
—
—
0
0
(3041096) Erythrocytes [Presence] in Urine by Automated
6
35
2.24
0.69
16.5
2.9
—
—
—
0
0
(40768804) Tissue Pathology biopsy report
8
57
1.93
0.58
1.5
1.8
—
—
—
0
0
(3003031) Transferrin.carbohydrate deficient.disialo/Transferrin.total in Serum or Plasma
0
14
0.00
0.44
0.0
4.4
—
1.2
—
0
14
(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip
7
49
1.85
0.42
14.4
2.6
—
—
—
0
0
(3044640) Blood type and Crossmatch panel - Blood
5
37
1.54
0.28
2.8
2.4
—
—
—
0
0
(3019225) pH of Specimen
0
11
0.00
0.22
0.0
12.7
—
—
—
0
0
(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma
0
12
0.00
0.22
0.0
4.8
—
—
—
0
0
(21494755) Public health laboratory ask at order entry panel
0
13
0.00
0.21
0.0
1.3
—
—
—
0
0
(3050380) Cytology report of Cervical or vaginal smear or scraping Cyto stain
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
6
57
1.09
0.00
5.5
3.9
—
—
—
0
0
(3011371) Neisseria gonorrhoeae DNA [Presence] in Specimen by NAA with probe detection
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
(1761868) Lipid panel - Serum or Plasma
5
51
0.97
0.00
1.8
2.4
—
—
—
0
0
(3050129) First trimester maternal screen panel - Serum or Plasma
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
(46235759) Influenza virus B RNA [Presence] in Nasopharynx by NAA with probe detection
0
7
0.00
0.00
0.0
4.1
—
—
—
0
0
(3027008) Opiates [Presence] in Urine
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
(40758310) Human epididymis protein 4 [Moles/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.2
—
72.2
—
0
5
(3028300) Cannabinoids [Presence] in Urine
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
(3044254) Respiratory syncytial virus RNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
3.6
—
—
—
0
0
(40768793) Breast Pathology biopsy report
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(43534045) MCM6 gene c.-13910C>T and -13915T>G [Identifier] in Blood or Tissue by Molecular genetics method Nominal
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(40761535) Cells panel - Urine sediment
0
7
0.00
0.00
0.0
3.0
—
—
—
0
0
(40762366) Oxygen capacity [Volume Fraction] in Arterial blood
0
6
0.00
0.00
0.0
3.7
—
—
—
0
0
(36032419) SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Immunoassay
0
7
0.00
0.00
0.0
1.7
—
—
—
0
0
(3024403) Complement+Immunoglobulin [Units/volume] in Red Blood Cells
0
5
0.00
0.00
0.0
2.0
—
—
—
0
0
(3007778) Kappa light chains/Lambda light chains [Mass Ratio] in Serum
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3025130) Human papilloma virus identified in Specimen
0
5
0.00
0.00
0.0
2.0
—
—
—
0
0
(3027944) Amphetamines [Presence] in Urine
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
(3019539) Treponema pallidum Ab [Titer] in Serum by Hemagglutination
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3000764) Benzodiazepines [Presence] in Urine
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint G6_AUTODYS and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have G6_AUTODYS.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: G6_AUTODYS – Autonomic dysreflexia

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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