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This is a non-core endpoint: only basic statistics are computed.

Pregnant state, incidental

Z21_PREGNANT_STATE_INCIDENTAL

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

only females

293373

2. Check conditions

None

293373

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Z33
  • Cause of death: ICD-10 Z33

2 out of 7 registries used, show all original rules.

24

4. Check minimum number of events

None

24

5. Include endpoints

None

24

6. Filter based on genotype QC (FinnGen only)

24

Control definitions (FinnGen only)

Control exclude
Z21_PERSONS_ENCOUNTERI_HEALTH_SERVI_CIRCUMSTANC_RELATED_REPRODUCTION

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
Z3

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 24 24 -
Unadjusted period prevalence (%) 0.01 0.01 -
Median age at first event (years) 26.15 26.15 -

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3026008) Bacteria identified in Urine by Culture
15
42
7.77
5.25
3.0
1.9
—
—
—
0
0
(3029287) Urinalysis microscopic panel [#/volume] - Urine by Automated count
14
47
5.75
4.27
4.2
3.3
—
—
—
0
0
(3015736) pH of Urine
15
56
5.43
3.89
3.5
2.5
—
—
—
0
0
(3023511) Choriogonadotropin [Units/volume] in Urine
9
19
6.89
3.68
1.6
1.4
—
—
—
0
0
(3006093) Chlamydia trachomatis DNA [Presence] in Specimen by NAA with probe detection
14
53
4.94
3.57
1.9
2.0
—
—
—
0
0
(36304419) Bacteria [Presence] in Urine
11
37
4.64
3.18
4.6
2.4
—
—
—
0
0
(3022621) pH of Urine by Test strip
5
5
12.11
3.12
7.8
1.8
—
—
—
0
0
(3021589) Normoblasts [#/volume] in Blood
18
94
4.63
3.03
5.3
6.0
e9/l
0.0
0.0
0.00
13
78
(3026782) Osmolality of Urine
9
25
5.11
2.95
4.3
2.6
mosm/kgh2o
477.4
540.6
—
9
25
(3042936) Bacteria identified in Isolate by Culture
7
16
5.70
2.71
1.3
3.0
—
—
—
0
0
(3021584) Pregnancy associated plasma protein A [Units/volume] in Serum or Plasma
6
12
6.25
2.57
1.7
1.0
—
—
—
0
0
(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip
14
65
3.77
2.50
6.4
2.4
—
—
—
0
0
(3011397) Hemoglobin [Presence] in Urine by Test strip
9
31
4.02
2.39
3.3
2.4
—
—
—
0
0
(3018006) Microscopic observation [Identifier] in Cervix by Cyto stain.thin prep
13
61
3.47
2.23
1.9
1.5
—
—
—
0
0
(3011371) Neisseria gonorrhoeae DNA [Presence] in Specimen by NAA with probe detection
11
47
3.47
2.16
1.5
1.8
—
—
—
0
0
(3044640) Blood type and Crossmatch panel - Blood
9
35
3.49
2.08
2.1
2.2
—
—
—
0
0
(40768804) Tissue Pathology biopsy report
14
73
3.20
1.96
1.6
2.1
—
—
—
0
0
(3016431) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Serum or Plasma
13
65
3.18
1.95
5.8
8.8
mmol/l
1.2
1.2
0.13
13
56
(3019284) Hepatitis B virus surface Ag [Presence] in Serum
12
58
3.14
1.90
1.8
1.5
—
—
—
0
0
(46236098) ABO and Rh group [Type] in Blood by Confirmatory method
7
25
3.52
1.81
2.0
2.2
—
—
—
0
0
(3044889) 12 lead EKG panel
16
94
3.09
1.81
1.9
2.2
—
—
—
0
0
(3041096) Erythrocytes [Presence] in Urine by Automated
11
54
2.91
1.65
6.4
2.2
—
—
—
0
0
(3021347) Calcium.ionized [Moles/volume] in Serum or Plasma
12
62
2.87
1.64
4.4
5.3
mmol/l
1.2
1.2
0.42
12
56
(3023368) Bacteria identified in Blood by Culture
7
28
3.10
1.60
3.1
2.5
—
—
—
0
0
(3003510) Neisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection
12
64
2.75
1.52
2.1
1.9
—
—
—
0
0
(3037467) Urinalysis macro (dipstick) panel - Urine
18
120
2.99
1.52
7.0
3.3
—
—
—
0
0
(3007853) Bacteria identified in Skin by Aerobe culture
5
16
3.66
1.52
1.8
1.4
—
—
—
0
0
(3018677) aPTT in Platelet poor plasma by Coagulation assay
5
18
3.22
1.36
2.0
1.8
s
28.4
30.2
—
5
18
(3019832) Treponema pallidum Ab [Presence] in Serum
9
46
2.52
1.22
1.6
1.4
—
—
—
0
0
(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection
12
70
2.43
1.21
2.7
2.0
—
—
—
0
0
(3003191) Choriogonadotropin (pregnancy test) [Presence] in Serum or Plasma
5
21
2.73
1.15
4.0
1.6
—
—
—
0
0
(3021879) Hepatitis B virus core Ab [Presence] in Serum
5
22
2.59
1.09
1.6
1.3
—
—
—
0
0
(40761511) CBC panel - Blood by Automated count
24
210
+∞
1.06
13.7
7.4
—
—
—
0
0
(40758558) Short blood count panel - Blood
8
43
2.28
1.01
3.1
9.3
—
—
—
0
0
(3024135) Streptococcus.beta-hemolytic [Presence] in Throat by Organism specific culture
12
75
2.20
0.99
2.1
1.7
—
—
—
0
0
(3015399) Transferrin receptor.soluble [Mass/volume] in Serum or Plasma
9
53
2.11
0.90
2.2
1.9
mg/l
3.0
2.7
—
9
43
(46235355) HIV 1 and 2 tests - Meaningful Use set
12
84
1.86
0.66
2.0
1.8
—
—
—
0
0
(42870588) Differential panel, method unspecified - Blood
9
61
1.76
0.64
4.6
4.5
—
—
—
0
0
(42868674) Cholesterol in HDL/Cholesterol.total [Molar ratio] in Serum or Plasma
0
22
0.00
0.62
0.0
4.3
—
25.8
—
0
13
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
10
67
1.84
0.62
6.4
3.0
—
—
—
0
0
(1761868) Lipid panel - Serum or Plasma
5
80
0.53
0.59
2.4
1.8
—
—
—
0
0
(3017143) Hepatitis C virus Ab [Presence] in Serum
7
45
1.78
0.56
1.7
1.6
—
—
—
0
0
(3019225) pH of Specimen
0
15
0.00
0.43
0.0
9.1
—
—
—
0
0
(4010399)
0
15
0.00
0.43
0.0
1.3
—
—
—
0
0
(3001019) Free T4 and TSH panel - Serum or Plasma
0
15
0.00
0.43
0.0
1.5
—
—
—
0
0
(3003694) ABO and Rh group [Type] in Blood
7
52
1.49
0.36
1.9
1.3
—
—
—
0
0
(40760892) CBC W Ordered Manual Differential panel - Blood
8
61
1.46
0.33
3.5
4.5
—
—
—
0
0
(3033319) Streptococcus pyogenes Ag [Presence] in Throat
5
41
1.28
0.24
1.2
1.5
—
—
—
0
0
(586526) SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection
0
10
0.00
0.22
0.0
1.5
—
—
—
0
0
(3010813) Leukocytes [#/volume] in Blood
24
228
+∞
0.22
21.0
13.2
e9/l
7.7
6.9
1.37
24
222
(3051552) Clostridioides difficile toxin genes [Presence] in Stool by NAA with probe detection
0
12
0.00
0.22
0.0
1.4
—
—
—
0
0
(3007461) Platelets [#/volume] in Blood
24
226
+∞
0.20
21.1
13.3
e9/l
288.4
280.9
0.23
24
221
(3019900) Cholesterol [Moles/volume] in Serum or Plasma
18
187
0.85
0.10
3.8
3.1
mmol/l
4.9
4.7
0.45
18
175
(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma
18
186
0.87
0.10
3.8
3.0
mmol/l
1.4
1.5
0.31
18
174
(3015377) Calcium [Moles/volume] in Serum or Plasma
5
60
0.79
0.09
2.6
3.8
mmol/l
2.3
2.3
—
5
53
(706163) SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection
19
182
1.21
0.09
5.9
3.6
—
—
—
0
0
(3013327) Hepatitis A virus IgM Ab [Presence] in Serum
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3024891) Influenza virus A+B Ag [Presence] in Specimen
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3024666) Lithium, Blood [Moles/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
13.5
—
0.6
—
0
6
(3002523) Influenza virus A Ag [Presence] in Specimen
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3019539) Treponema pallidum Ab [Titer] in Serum by Hemagglutination
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(3008832) Norclozapine [Moles/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
13.1
—
837.1
—
0
7
(3001308) Cholesterol in LDL [Moles/volume] in Serum or Plasma
19
187
1.08
0.00
3.7
3.1
mmol/l
3.0
2.8
0.55
19
176
(3029634) Reagin Ab [Titer] in Serum by VDRL
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
(3022313) Gas panel - Capillary blood
0
8
0.00
0.00
0.0
7.4
—
—
—
0
0
(40768793) Breast Pathology biopsy report
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3003740) Influenza virus B Ag [Presence] in Specimen
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3004490) Bicarbonate [Moles/volume] standard in Capillary blood
0
8
0.00
0.00
0.0
6.8
—
23.2
—
0
8
(3015816) F5 gene p.Arg506Gln [Presence] in Blood or Tissue by Molecular genetics method
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3039162) Centromere protein B Ab [Units/volume] in Serum
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3020287) Protein C actual/normal in Platelet poor plasma by Coagulation assay
0
5
0.00
0.00
0.0
1.0
—
116.2
—
0
5
(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting
18
177
1.07
0.00
3.4
2.8
mmol/l
1.5
1.1
1.09
18
165
(3004616) Nuclear Ab [Presence] in Serum
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3007844) Epstein Barr virus capsid IgM Ab [Units/volume] in Serum by Immunoassay
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3017446) Testosterone [Moles/volume] in Serum or Plasma
0
8
0.00
0.00
0.0
1.3
—
5.6
—
0
8
(3036086) Jo-1 extractable nuclear Ab [Units/volume] in Serum by Immunoassay
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
(3019897) Erythrocyte distribution width [Ratio] by Automated count
0
8
0.00
0.00
0.0
1.4
—
12.6
—
0
8
(3000081) cloZAPine [Moles/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
14.1
—
1403.9
—
0
7

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: Z21_PREGNANT_STATE_INCIDENTAL – Pregnant state, incidental

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).