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This is a non-core endpoint: only basic statistics are computed.

Assault by unspecified chemical or noxious substance

VWXY20_ASSAU_UNSPE_CHEMIC_NOXIO_SUBST

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 X90
  • Cause of death: ICD-10 X90

2 out of 7 registries used, show all original rules.

13

4. Check minimum number of events

None

13

5. Include endpoints

None

13

6. Filter based on genotype QC (FinnGen only)

13

Control definitions (FinnGen only)

Control exclude
VWXY20_ASSAULT

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
X85-Y09

Case counts by codes

FinnGen case counts by registry codes:

Not enough data for upset plot.

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 13 - 10
Unadjusted period prevalence (%) 0.00 - 0.00
Median age at first event (years) 35.37 - 34.04

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3033319) Streptococcus pyogenes Ag [Presence] in Throat
5
22
3.04
1.15
1.6
1.8
—
—
—
0
0
(3007220) Creatine kinase [Enzymatic activity/volume] in Serum or Plasma
6
28
3.09
1.10
2.5
2.1
u/l
2143.8
145.5
—
6
28
(3015736) pH of Urine
5
32
1.90
0.49
2.8
3.0
—
—
—
0
0
(40761511) CBC panel - Blood by Automated count
13
115
+∞
0.44
6.1
7.4
—
—
—
0
0
(3019800) Troponin T.cardiac [Mass/volume] in Serum or Plasma
5
35
1.69
0.29
4.2
2.6
—
33.9
—
0
15
(3021601) Nitrite [Presence] in Urine by Test strip
5
40
1.40
0.26
3.8
4.4
—
0.0
—
0
6
(3037467) Urinalysis macro (dipstick) panel - Urine
8
65
1.59
0.25
1.8
3.4
—
—
—
0
0
(3051552) Clostridioides difficile toxin genes [Presence] in Stool by NAA with probe detection
0
11
0.00
0.22
0.0
1.7
—
—
—
0
0
(3019832) Treponema pallidum Ab [Presence] in Serum
0
11
0.00
0.22
0.0
2.0
—
—
—
0
0
(43054914) Glucose tolerance 2 hours panel - Serum or Plasma
0
10
0.00
0.22
0.0
1.7
—
—
—
0
0
(3026008) Bacteria identified in Urine by Culture
0
10
0.00
0.22
0.0
1.4
—
—
—
0
0
(3028026) IgM [Mass/volume] in Serum or Plasma
0
10
0.00
0.22
0.0
1.6
—
1.1
—
0
10
(3010156) C reactive protein [Mass/volume] in Serum or Plasma by High sensitivity method
0
10
0.00
0.22
0.0
1.3
—
1.8
—
0
5
(3025941) Bacteria identified in Stool by Culture
0
10
0.00
0.22
0.0
1.5
—
—
—
0
0
(3002256) Pathology report gross observation
0
10
0.00
0.22
0.0
1.5
—
—
—
0
0
(3044491) Cholesterol non HDL [Mass/volume] in Serum or Plasma
0
12
0.00
0.22
0.0
1.8
—
—
—
0
0
(3009261) Glucose [Presence] in Urine by Test strip
5
42
1.31
0.12
2.8
3.2
—
0.0
—
0
6
(3035350) Ketones [Presence] in Urine by Test strip
5
42
1.31
0.12
2.4
3.1
—
0.0
—
0
6
(3044889) 12 lead EKG panel
8
71
1.33
0.11
2.5
2.8
—
—
—
0
0
(36032269) Testosterone Free [Moles/volume] in Serum or Plasma by calculation
0
6
0.00
0.00
0.0
1.3
—
407.7
—
0
6
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
5
51
0.97
0.00
3.6
3.1
—
—
—
0
0
(1001926) Buprenorphine [Presence] in Urine by Screen method
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3009343) pH of Capillary blood
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3004248) Sex hormone binding globulin [Moles/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
2.0
—
26.5
—
0
6
(3024980) IgG subclass 4 [Mass/volume] in Serum
0
6
0.00
0.00
0.0
1.5
—
0.5
—
0
6
(3022250) Lactate dehydrogenase [Enzymatic activity/volume] in Serum or Plasma by Lactate to pyruvate reaction
0
6
0.00
0.00
0.0
2.0
—
209.8
—
0
6
(3000764) Benzodiazepines [Presence] in Urine
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
(3004119) Hemoglobin [Mass/volume] in Venous blood
0
5
0.00
0.00
0.0
1.4
—
157.2
—
0
5
(1761868) Lipid panel - Serum or Plasma
5
49
1.03
0.00
3.8
2.3
—
—
—
0
0
(3004383) Neutrophil cytoplasmic Ab.classic [Titer] in Serum by Immunofluorescence
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
(3012544) pH of Venous blood
0
8
0.00
0.00
0.0
1.5
—
—
—
0
0
(4034850)
0
5
0.00
0.00
0.0
17.8
—
—
—
0
0
(3048929) Epstein Barr virus Ab [Presence] in Serum
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3049804) Myeloperoxidase IgG Ab [Units/volume] in Serum
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3016879) Cocaine [Presence] in Urine
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(3019060) Gas panel - Arterial blood
0
7
0.00
0.00
0.0
3.7
—
—
—
0
0
(3027944) Amphetamines [Presence] in Urine
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma
0
8
0.00
0.00
0.0
13.9
—
—
—
0
0
(586526) SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(1002224) Polysomnography panel
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3034770) Mitochondria Ab [Titer] in Serum
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
(3024354) Oxygen [Partial pressure] in Venous blood
0
8
0.00
0.00
0.0
1.4
—
4.5
—
0
8
(3023024) Carbon dioxide [Partial pressure] in Capillary blood
0
5
0.00
0.00
0.0
1.0
—
5.4
—
0
5
(3028300) Cannabinoids [Presence] in Urine
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
(3007566) Smooth muscle Ab [Titer] in Serum
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(43534045) MCM6 gene c.-13910C>T and -13915T>G [Identifier] in Blood or Tissue by Molecular genetics method Nominal
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3027008) Opiates [Presence] in Urine
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
(3022914) Cancer Ag 19-9 [Units/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
5.0
—
11.2
—
0
5
(3021447) Carbon dioxide [Partial pressure] in Venous blood
0
8
0.00
0.00
0.0
1.5
—
5.5
—
0
8
(3019225) pH of Specimen
0
7
0.00
0.00
0.0
4.4
—
—
—
0
0
(3011288) Drugs identified in Urine by Screen method
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
(3004588) Protein electrophoresis panel - Serum or Plasma
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: VWXY20_ASSAU_UNSPE_CHEMIC_NOXIO_SUBST – Assault by unspecified chemical or noxious substance

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).