This is a non-core endpoint: only basic statistics are computed.
Toxic effect of noxious substances eaten as seafood
ST19_TOXIC_EFFECT_NOXIO_SUBST_EATEN_SEAFO
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
9 |
4. Check minimum number of eventsNone |
9 |
5. Include endpointsNone |
9 |
6. Filter based on genotype QC (FinnGen only) |
9 |
Control definitions (FinnGen only)
- Control exclude
- ST19_TOXIC_EFFEC_SUBST_CHIEF_NONME_SOURCE
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF4
- Parent code in ICD-10
- T5[1-9]|T6[0-5]
- Name in latin
- Effectus toxicus substantiarum nocivarum cibo pelagio sumptarum
Similar endpoints
↥List of similar endpoints to
Toxic effect of noxious substances eaten as seafood
based on the number of shared cases.
Similar with more cases:
- Toxic effects of substances chiefly nonmedicinal as to source
- Injury, poisoning and certain other consequences of external causes
- Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified
- Any operation in hilmo
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥FinnGen case counts by registry codes:
Not enough data for upset plot.
Not enough data for upset table.
Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 9 | 5 | - |
| Unadjusted period prevalence (%) | 0.00 | 0.00 | - |
| Median age at first event (years) | 73.65 | 80.23 | - |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3020682) Albumin/Creatinine [Ratio] in Urine
0
16
0.00
0.46
0.0
3.2
—
1.8
—
0
7
(3009508) Creatinine [Moles/volume] in Urine
0
14
0.00
0.45
0.0
1.9
—
6.3
—
0
9
(3003694) ABO and Rh group [Type] in Blood
0
12
0.00
0.23
0.0
1.4
—
—
—
0
0
(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection
0
12
0.00
0.23
0.0
2.9
—
—
—
0
0
(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma
0
13
0.00
0.22
0.0
10.8
—
—
—
0
0
(3025941) Bacteria identified in Stool by Culture
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(42529201) Cancer Ag 19-9 [Units/volume] in Serum or Plasma by Immunoassay
0
5
0.00
0.00
0.0
1.0
—
48.8
—
0
5
(3019060) Gas panel - Arterial blood
0
5
0.00
0.00
0.0
3.2
—
—
—
0
0
(3022621) pH of Urine by Test strip
0
5
0.00
0.00
0.0
2.8
—
—
—
0
0
(3008152) Bicarbonate [Moles/volume] in Arterial blood
0
5
0.00
0.00
0.0
5.6
—
26.8
—
0
5
(3002173) Hemoglobin [Mass/volume] in Arterial blood
0
5
0.00
0.00
0.0
3.4
—
123.6
—
0
5
(4035726)
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3016502) Oxygen saturation in Arterial blood
0
6
0.00
0.00
0.0
3.3
—
95.2
—
0
6
(3014576) Chloride [Moles/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
3.7
—
103.5
—
0
6
(3027801) Oxygen [Partial pressure] in Arterial blood
0
6
0.00
0.00
0.0
3.7
—
11.1
—
0
6
(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture
0
8
0.00
0.00
0.0
6.0
—
—
—
0
0
(43054914) Glucose tolerance 2 hours panel - Serum or Plasma
0
6
0.00
0.00
0.0
1.7
—
—
—
0
0
(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection
0
8
0.00
0.00
0.0
2.6
—
—
—
0
0
(36031861) Influenza virus A and B and SARS-CoV-2 (COVID-19) and Respiratory syncytial virus RNA panel - Respiratory system specimen by NAA with probe detection
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
(40761536) Microorganisms panel - Urine sediment
0
8
0.00
0.00
0.0
3.6
—
—
—
0
0
(3003396) Base excess in Arterial blood by calculation
0
6
0.00
0.00
0.0
3.7
—
1.6
—
0
6
(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection
0
8
0.00
0.00
0.0
2.1
—
—
—
0
0
(3027946) Carbon dioxide [Partial pressure] in Arterial blood
0
6
0.00
0.00
0.0
3.7
—
5.3
—
0
6
(3002256) Pathology report gross observation
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: ST19_TOXIC_EFFECT_NOXIO_SUBST_EATEN_SEAFO – Toxic effect of noxious substances eaten as seafood
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).