This is a non-core endpoint: only basic statistics are computed.
Toxic effect of aflatoxin and other mycotoxin food contaminants
ST19_TOXIC_EFFECT_AFLAT_OTHER_MYCOT_FOOD_CONTAMINAN
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
10 |
4. Check minimum number of eventsNone |
10 |
5. Include endpointsNone |
10 |
6. Filter based on genotype QC (FinnGen only) |
10 |
Control definitions (FinnGen only)
- Control exclude
- ST19_TOXIC_EFFEC_SUBST_CHIEF_NONME_SOURCE
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF4
- Parent code in ICD-10
- T5[1-9]|T6[0-5]
- Name in latin
- Effectus toxicus aflatoxini et aliorum mycotoxinorum cibum contaminantium
Similar endpoints
↥List of similar endpoints to
Toxic effect of aflatoxin and other mycotoxin food contaminants
based on the number of shared cases.
Similar with more cases:
- Toxic effects of substances chiefly nonmedicinal as to source
- Injury, poisoning and certain other consequences of external causes
- Any operation in hilmo
- Any event in hilmo or specialist outpatient
- Any prescribed medicine buy
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 10 | - | 6 |
| Unadjusted period prevalence (%) | 0.00 | - | 0.00 |
| Median age at first event (years) | 65.44 | - | 64.16 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(1761868) Lipid panel - Serum or Plasma
0
23
0.00
0.93
0.0
3.1
—
—
—
0
0
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
5
28
2.55
0.79
4.2
3.5
—
—
—
0
0
(3041096) Erythrocytes [Presence] in Urine by Automated
0
16
0.00
0.45
0.0
3.5
—
—
—
0
0
(3019900) Cholesterol [Moles/volume] in Serum or Plasma
5
62
0.62
0.29
7.6
4.6
mmol/l
5.1
4.5
—
5
54
(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma
5
62
0.62
0.29
7.6
4.7
mmol/l
1.4
1.5
—
5
54
(3007853) Bacteria identified in Skin by Aerobe culture
0
10
0.00
0.23
0.0
1.9
—
—
—
0
0
(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting
5
60
0.67
0.13
7.2
4.2
mmol/l
1.2
1.4
—
5
51
(3004410) Hemoglobin A1c/Hemoglobin.total in Blood
5
60
0.67
0.13
10.8
5.5
mmol/mol
47.6
40.9
—
5
51
(3026910) Gamma glutamyl transferase [Enzymatic activity/volume] in Serum or Plasma
5
40
1.49
0.13
1.8
2.9
u/l
18.8
47.3
—
5
34
(3022145) Colonoscopy Study observation
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(40761536) Microorganisms panel - Urine sediment
0
5
0.00
0.00
0.0
2.6
—
—
—
0
0
(3002109) Cholesterol in LDL/Cholesterol in HDL [Mass Ratio] in Serum or Plasma
0
9
0.00
0.00
0.0
2.4
—
—
—
0
0
(3044491) Cholesterol non HDL [Mass/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
1.6
—
—
—
0
0
(3003338) MCHC [Mass/volume]
5
47
1.13
0.00
37.8
21.9
g/l
331.2
332.6
—
5
47
(3033319) Streptococcus pyogenes Ag [Presence] in Throat
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture
0
9
0.00
0.00
0.0
3.2
—
—
—
0
0
(40768797) Stomach Pathology biopsy report
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3042936) Bacteria identified in Isolate by Culture
0
9
0.00
0.00
0.0
1.7
—
—
—
0
0
(3037467) Urinalysis macro (dipstick) panel - Urine
5
45
1.22
0.00
3.8
4.8
—
—
—
0
0
(3035995) Alkaline phosphatase [Enzymatic activity/volume] in Serum or Plasma
5
53
0.89
0.00
10.6
6.1
u/l
68.4
85.4
—
5
47
(43054914) Glucose tolerance 2 hours panel - Serum or Plasma
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
(3034780) Angiotensin converting enzyme [Enzymatic activity/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
3.0
—
29.0
—
0
7
(3003510) Neisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection
0
7
0.00
0.00
0.0
1.6
—
—
—
0
0
(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection
0
7
0.00
0.00
0.0
1.7
—
—
—
0
0
(4010399)
0
8
0.00
-0.00
0.0
1.6
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: ST19_TOXIC_EFFECT_AFLAT_OTHER_MYCOT_FOOD_CONTAMINAN – Toxic effect of aflatoxin and other mycotoxin food contaminants
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).