info icon

This is a non-core endpoint: only basic statistics are computed.

Urethral discharge

R18_URETHRAL_DISCH

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 R36
  • Cause of death: ICD-10 R36

2 out of 7 registries used, show all original rules.

44

4. Check minimum number of events

None

44

5. Include endpoints

None

44

6. Filter based on genotype QC (FinnGen only)

44

Control definitions (FinnGen only)

Control exclude
R18_SYMPTOMS_SIGNS_INVOLVI_URINARY_SYSTEM

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
R3
Name in latin
Fluor urethralis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 44 17 27
Unadjusted period prevalence (%) 0.01 0.01 0.01
Median age at first event (years) 49.52 44.85 52.45

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3016417) Amylase.pancreatic [Enzymatic activity/volume] in Serum or Plasma
10
27
4.50
3.58
6.4
2.5
u/l
26.1
25.8
—
10
22
(3026008) Bacteria identified in Urine by Culture
17
68
3.44
3.57
3.6
2.3
—
—
—
0
0
(3037467) Urinalysis macro (dipstick) panel - Urine
35
229
3.58
3.39
7.1
3.6
—
—
—
0
0
(3029287) Urinalysis microscopic panel [#/volume] - Urine by Automated count
22
109
3.04
3.19
5.9
2.3
—
—
—
0
0
(3049717) Cytology report of Urine Cyto stain
6
8
8.45
3.16
1.2
3.1
—
—
—
0
0
(3002030) Lymphocytes/100 leukocytes in Blood
27
151
3.04
3.15
6.4
5.4
%
31.4
26.8
1.61
27
144
(36304419) Bacteria [Presence] in Urine
19
92
2.87
2.81
5.9
1.9
—
—
—
0
0
(3003694) ABO and Rh group [Type] in Blood
19
92
2.87
2.81
1.7
1.5
—
—
—
0
0
(3030306) Epithelial cells.non-squamous [#/volume] in Urine by Automated count
13
52
3.13
2.65
5.1
1.7
e6/l
0.7
0.7
—
7
32
(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection
11
40
3.33
2.60
4.2
2.0
—
—
—
0
0
(3000850) Epithelial cells [#/volume] in Urine
15
67
2.88
2.53
3.9
1.9
e6/l
2.0
4.1
1.03
15
58
(3029879) Epithelial cells.squamous [#/volume] in Urine by Automated count
12
47
3.14
2.52
5.4
1.8
e6/l
0.4
3.0
—
6
27
(3000991) Gas panel - Venous blood
8
23
4.01
2.40
6.4
3.9
—
—
—
0
0
(3019069) Monocytes/100 leukocytes in Blood
25
150
2.54
2.33
6.7
5.6
%
8.3
8.6
0.26
25
145
(3003510) Neisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection
10
37
3.20
2.28
3.8
1.8
—
—
—
0
0
(42870588) Differential panel, method unspecified - Blood
20
109
2.53
2.26
6.3
5.2
—
—
—
0
0
(3022096) Basophils/100 leukocytes in Blood
24
143
2.49
2.25
6.9
5.3
%
0.5
0.7
0.76
24
135
(3010517) Carboxyhemoglobin/Hemoglobin.total in Venous blood
6
14
4.78
2.23
4.0
3.0
%
0.9
1.8
—
6
14
(3006140) Bilirubin.total [Moles/volume] in Serum or Plasma
27
171
2.50
2.20
8.0
6.2
umol/l
10.1
10.4
0.12
27
164
(40758558) Short blood count panel - Blood
14
65
2.69
2.16
7.5
6.5
—
—
—
0
0
(3006093) Chlamydia trachomatis DNA [Presence] in Specimen by NAA with probe detection
6
15
4.45
2.12
5.7
2.5
—
—
—
0
0
(3002256) Pathology report gross observation
9
33
3.16
2.07
1.3
1.2
—
—
—
0
0
(3011397) Hemoglobin [Presence] in Urine by Test strip
13
61
2.61
1.95
4.3
2.8
—
—
—
0
0
(3023368) Bacteria identified in Blood by Culture
15
76
2.48
1.93
8.4
4.2
—
—
—
0
0
(3051714) Fibrin D-dimer FEU [Mass/volume] in Platelet poor plasma
14
69
2.51
1.90
2.0
1.8
mg/l
1.3
1.6
—
8
55
(1001926) Buprenorphine [Presence] in Urine by Screen method
5
12
4.55
1.87
1.0
1.1
—
—
—
0
0
(3023421) Hepatitis B virus surface Ab [Units/volume] in Serum
5
12
4.55
1.87
1.8
1.8
—
216.8
—
0
5
(3034770) Mitochondria Ab [Titer] in Serum
5
12
4.55
1.87
1.2
1.4
—
—
—
0
0
(3013721) Aspartate aminotransferase [Enzymatic activity/volume] in Serum or Plasma
20
118
2.27
1.83
6.8
2.5
u/l
33.6
34.5
0.05
20
107
(3028300) Cannabinoids [Presence] in Urine
5
13
4.19
1.76
1.0
1.2
—
—
—
0
0
(3016293) Bicarbonate [Moles/volume] in Serum or Plasma
5
13
4.19
1.76
3.4
4.8
mmol/l
26.7
23.8
—
5
13
(3016879) Cocaine [Presence] in Urine
5
13
4.19
1.76
1.0
1.1
—
—
—
0
0
(3027008) Opiates [Presence] in Urine
5
13
4.19
1.76
1.0
1.2
—
—
—
0
0
(3000764) Benzodiazepines [Presence] in Urine
5
13
4.19
1.76
1.0
1.2
—
—
—
0
0
(3021601) Nitrite [Presence] in Urine by Test strip
24
155
2.21
1.75
8.8
4.3
estimate
0.0
0.0
—
8
36
(3017143) Hepatitis C virus Ab [Presence] in Serum
11
50
2.60
1.74
2.6
1.8
—
—
—
0
0
(3021879) Hepatitis B virus core Ab [Presence] in Serum
7
25
3.13
1.73
3.1
1.8
—
—
—
0
0
(40761536) Microorganisms panel - Urine sediment
7
25
3.13
1.73
6.7
3.1
—
—
—
0
0
(3013826) Glucose [Moles/volume] in Serum or Plasma
29
203
2.26
1.72
5.1
3.7
mmol/l
6.8
6.6
0.19
29
181
(46235355) HIV 1 and 2 tests - Meaningful Use set
15
80
2.33
1.71
2.5
1.9
—
—
—
0
0
(3029937) Albumin [Presence] in Urine by Test strip
15
80
2.33
1.71
6.9
2.9
estimate
0.0
0.0
—
7
36
(3035350) Ketones [Presence] in Urine by Test strip
24
157
2.16
1.67
6.5
2.8
estimate
0.0
0.0
—
8
37
(3021447) Carbon dioxide [Partial pressure] in Venous blood
7
26
3.00
1.66
9.4
3.0
kpa
6.2
5.6
—
7
26
(3002032) Base excess in Venous blood by calculation
7
26
3.00
1.66
9.4
3.0
mmol/l
1.2
3.1
—
7
19
(3012544) pH of Venous blood
7
26
3.00
1.66
9.4
3.0
—
—
—
0
0
(3004119) Hemoglobin [Mass/volume] in Venous blood
5
15
3.62
1.57
5.4
3.3
g/l
151.4
131.2
—
5
15
(3018010) Neutrophils/100 leukocytes in Blood
23
151
2.10
1.56
7.1
5.0
%
52.3
59.0
2.26
23
146
(3009261) Glucose [Presence] in Urine by Test strip
24
162
2.06
1.49
6.6
3.0
estimate
0.0
0.0
—
8
34
(3015736) pH of Urine
19
118
2.07
1.47
6.9
2.6
—
—
—
0
0
(3024354) Oxygen [Partial pressure] in Venous blood
6
23
2.85
1.42
4.8
3.1
kpa
5.9
4.9
—
6
23
(3007853) Bacteria identified in Skin by Aerobe culture
9
44
2.31
1.37
1.7
1.4
—
—
—
0
0
(3033319) Streptococcus pyogenes Ag [Presence] in Throat
8
35
2.56
1.35
1.4
1.4
—
—
—
0
0
(3016251) Hemoglobin.gastrointestinal [Presence] in Stool
5
18
3.00
1.32
1.4
1.9
—
—
—
0
0
(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture
7
30
2.58
1.18
6.0
3.2
—
—
—
0
0
(3024135) Streptococcus.beta-hemolytic [Presence] in Throat by Organism specific culture
11
60
2.11
1.15
1.5
1.4
—
—
—
0
0
(3018418) pH of Serum or Plasma
14
85
1.95
1.11
6.6
2.7
ph
7.4
7.4
—
5
19
(706163) SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection
31
245
1.90
1.08
3.4
3.2
—
—
—
0
0
(3002385) Erythrocyte distribution width [Ratio]
36
301
2.08
1.07
29.6
13.9
%
13.5
13.5
0.07
36
293
(3000492) Spirometry study
7
35
2.18
1.05
1.0
1.4
—
—
—
0
0
(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip
18
121
1.83
1.05
6.2
3.0
—
—
—
0
0
(3019800) Troponin T.cardiac [Mass/volume] in Serum or Plasma
19
130
1.81
1.05
5.4
3.6
ng/l
19.6
64.3
0.81
12
84
(3003031) Transferrin.carbohydrate deficient.disialo/Transferrin.total in Serum or Plasma
10
56
2.02
0.97
1.7
2.3
%
1.4
1.3
—
10
50
(3016431) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Serum or Plasma
20
143
1.73
0.93
6.6
4.8
mmol/l
1.2
1.2
0.13
15
118
(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection
8
45
1.95
0.90
2.6
2.1
—
—
—
0
0
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
21
157
1.65
0.80
4.9
3.7
—
—
—
0
0
(3041096) Erythrocytes [Presence] in Urine by Automated
14
94
1.72
0.79
7.2
2.8
—
—
—
0
0
(3035995) Alkaline phosphatase [Enzymatic activity/volume] in Serum or Plasma
32
268
1.71
0.77
12.3
6.8
u/l
76.1
77.3
0.07
32
256
(3008230) Borrelia burgdorferi IgM Ab [Units/volume] in Serum
5
24
2.22
0.77
2.2
2.3
—
—
—
0
0
(3048816) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Blood
5
25
2.12
0.75
3.4
3.3
mmol/l
1.2
1.2
—
5
25
(3018006) Microscopic observation [Identifier] in Cervix by Cyto stain.thin prep
7
41
1.84
0.74
1.4
1.3
—
—
—
0
0
(3012516) Albumin [Mass/volume] in Urine
14
96
1.67
0.73
3.1
2.9
mg/l
42.0
40.7
—
5
63
(3019832) Treponema pallidum Ab [Presence] in Serum
7
44
1.70
0.69
1.6
1.5
—
—
—
0
0
(3044640) Blood type and Crossmatch panel - Blood
15
108
1.59
0.64
3.1
2.4
—
—
—
0
0
(3042936) Bacteria identified in Isolate by Culture
8
52
1.66
0.64
1.5
2.0
—
—
—
0
0
(3005772) Bilirubin.conjugated [Moles/volume] in Serum or Plasma
6
36
1.77
0.59
5.8
2.2
umol/l
5.3
8.3
—
6
29
(3044889) 12 lead EKG panel
29
246
1.52
0.58
4.1
3.5
—
—
—
0
0
(3019284) Hepatitis B virus surface Ag [Presence] in Serum
9
64
1.51
0.56
2.4
1.8
—
—
—
0
0
(3019050) Tissue transglutaminase IgA Ab [Units/volume] in Serum
11
78
1.55
0.49
1.1
1.3
u/ml
0.7
1.2
—
6
26
(43054914) Glucose tolerance 2 hours panel - Serum or Plasma
5
35
1.48
0.41
3.2
1.8
—
—
—
0
0
(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting
35
371
0.72
0.40
5.3
3.8
mmol/l
1.4
1.3
0.25
29
346
(3020460) C reactive protein [Mass/volume] in Serum or Plasma
39
363
1.65
0.40
26.0
11.5
mg/l
20.7
20.0
0.04
34
271
(3001784) Prostate Specific Ag Free/Prostate specific Ag.total in Serum or Plasma
17
138
1.38
0.38
3.9
4.5
%
27.0
23.8
—
7
60
(43054903) Holo-transcobalamin II [Moles/volume] in Serum
17
139
1.36
0.36
2.2
1.7
pmol/l
98.3
94.1
—
7
67
(3013512) EKG study
14
111
1.38
0.36
4.9
3.6
—
—
—
0
0
(3020682) Albumin/Creatinine [Ratio] in Urine
13
103
1.37
0.33
4.8
3.7
mg/mmol
6.4
4.0
—
6
69
(40760892) CBC W Ordered Manual Differential panel - Blood
10
77
1.39
0.29
2.2
4.5
—
—
—
0
0
(3022145) Colonoscopy Study observation
5
37
1.40
0.24
1.8
1.5
—
—
—
0
0
(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma
5
39
1.32
0.24
6.6
6.5
—
—
—
0
0
(3000494) Fungus identified in Specimen by Culture
5
41
1.25
0.23
1.0
1.6
—
—
—
0
0
(3014162) Mycobacterium tuberculosis DNA [Presence] in Specimen by NAA with probe detection
0
11
0.00
0.21
0.0
2.9
—
—
—
0
0
(3023150) Myeloperoxidase Ab [Units/volume] in Serum
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
(4034850)
0
10
0.00
0.21
0.0
2.9
—
—
—
0
0
(3012110) Lysozyme [Mass/volume] in Serum or Plasma
0
10
0.00
0.21
0.0
3.5
—
10.2
—
0
10
(40768800) Prostate Pathology biopsy report
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
(3037522) Nuclear Ab [Titer] in Serum
6
48
1.29
0.21
1.2
1.5
—
410.9
—
0
11
(3004383) Neutrophil cytoplasmic Ab.classic [Titer] in Serum by Immunofluorescence
0
13
0.00
0.21
0.0
1.0
—
—
—
0
0
(3046870) Tissue transglutaminase IgG Ab [Units/volume] in Serum
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
(3002434) Lupus erythematosus deoxynucleoproteins IgG Ab [Units/volume] in Serum by Immunoassay
0
14
0.00
0.20
0.0
2.6
—
—
—
0
0
(3019150) Specific gravity of Urine by Refractometry
7
60
1.20
0.19
9.0
2.6
—
1.0
—
0
10
(3021614) Rheumatoid factor [Units/volume] in Serum or Plasma
7
60
1.20
0.19
1.3
1.2
—
32.6
—
0
21
(1761868) Lipid panel - Serum or Plasma
18
164
1.17
0.12
3.9
2.8
—
—
—
0
0
(3004789) Transferrin [Mass/volume] in Serum or Plasma
5
44
1.15
0.10
7.2
1.4
g/l
2.1
2.6
—
5
38
(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma
39
380
1.23
0.09
5.6
4.1
mmol/l
1.3
1.4
1.47
33
357
(46236098) ABO and Rh group [Type] in Blood by Confirmatory method
7
82
0.83
0.08
3.4
2.2
—
—
—
0
0
(3009542) Hematocrit [Volume Fraction] of Blood
35
341
1.13
0.07
28.0
11.6
%
42.4
41.2
0.81
26
267
(40768804) Tissue Pathology biopsy report
14
130
1.11
0.05
2.2
2.0
—
—
—
0
0
(3004616) Nuclear Ab [Presence] in Serum
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(3042206) Streptococcus agalactiae Ag [Presence] in Vaginal fluid
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3005570) Glucose [Moles/volume] in Urine
0
7
0.00
0.00
0.0
3.4
—
—
—
0
0
(42868716) Shigella species+EIEC invasion plasmid antigen H ipaH gene [Presence] in Stool by NAA with probe detection
0
7
0.00
0.00
0.0
2.4
—
—
—
0
0
(40760888) Immunoglobulin light chains.free panel - Serum
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3016881) Enterovirus RNA [Presence] in Specimen by NAA with probe detection
0
6
0.00
0.00
0.0
2.7
—
—
—
0
0
(3050238) Crystals [Presence] in Synovial fluid by Light microscopy
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(3023419) Bacteria identified in Sputum by Culture
0
5
0.00
0.00
0.0
2.8
—
—
—
0
0
(3011831) Apolipoprotein B/Apolipoprotein A-I [Percentile]
0
8
0.00
0.00
0.0
1.6
—
—
—
0
0
(3000855) Microscopic observation [Identifier] in Vaginal fluid by Gram stain
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3028531) Enolase.neuron specific [Mass/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.6
—
12.2
—
0
5
(3027544) Mycobacterium sp identified in Sputum by Organism specific culture
0
6
0.00
0.00
0.0
3.3
—
—
—
0
0
(3012202) Varicella zoster virus DNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
(3008364) Apolipoprotein A-I [Mass/volume] in Serum or Plasma
0
8
0.00
0.00
0.0
1.6
—
—
—
0
0
(3009595) Pneumocystis jiroveci DNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3040853) Adenovirus DNA [Identifier] in Specimen by NAA with probe detection
0
8
0.00
0.00
0.0
2.1
—
—
—
0
0
(40765161) Human bocavirus DNA [Presence] in Specimen by NAA with probe detection
0
8
0.00
0.00
0.0
2.1
—
—
—
0
0
(40769539) Bacteria identified based on 16S rRNA gene [Identifier] in Specimen by Sequencing
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3001788) Aldosterone [Moles/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.0
—
217.2
—
0
5
(3042194) Human metapneumovirus RNA [Presence] in Specimen by NAA with probe detection
0
8
0.00
0.00
0.0
2.1
—
—
—
0
0
(1175426) CD3 cells/100 lymphocytes in Blood
0
5
0.00
0.00
0.0
3.2
—
71.4
—
0
5
(3031478) Chlamydophila pneumoniae DNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3045424) Erythrocytes [Presence] in Urine
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
(3000620) Complement C3 [Mass/volume] in Serum or Plasma
0
8
0.00
0.00
0.0
1.8
—
1.3
—
0
8
(3017766) Complement C4 [Mass/volume] in Serum or Plasma
0
8
0.00
0.00
0.0
1.8
—
0.3
—
0
8
(3001405) CD3+CD8+ (T8 suppressor) cells [#/volume] in Blood
0
5
0.00
0.00
0.0
3.2
—
303.4
—
0
5
(3049539) Genetic diseases [Identifier] in Blood or Tissue by FISH Nominal
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3025023) Rhinovirus RNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
(3004915) Chlamydophila pneumoniae IgA Ab [Units/volume] in Serum
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
(3026470) Cobalt [Mass/volume] in Blood
0
5
0.00
0.00
0.0
2.2
—
4.4
—
0
5
(3035637) Corticotropin [Mass/volume] in Plasma
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(4062490)
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3014702) Chromogranin A [Moles/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
3.6
—
1.4
—
0
5
(3044941) Cell count panel - Synovial fluid
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(40766800) Mycobacterium tuberculosis stimulated gamma interferon release by CD4+ T-cells [Units/volume] corrected for background in Blood
0
6
0.00
0.00
0.0
1.7
—
—
—
0
0
(3035999) Lactate [Moles/volume] in Cerebral spinal fluid
0
5
0.00
0.00
0.0
1.4
—
1.8
—
0
5
(3025577) Chromium [Mass/volume] in Blood
0
5
0.00
0.00
0.0
2.2
—
2.7
—
0
5
(40768797) Stomach Pathology biopsy report
5
50
1.00
0.00
1.0
1.2
—
—
—
0
0
(3014791) Apolipoprotein B [Mass/volume] in Serum or Plasma
0
8
0.00
0.00
0.0
1.6
—
1.1
—
0
8
(3010503) CD19 cells [#/volume] in Blood
0
5
0.00
0.00
0.0
2.0
—
0.1
—
0
5
(3028369) Herpes simplex virus 1+2 DNA [Presence] in Specimen by NAA with probe detection
0
6
0.00
0.00
0.0
1.7
—
—
—
0
0
(3002109) Cholesterol in LDL/Cholesterol in HDL [Mass Ratio] in Serum or Plasma
5
51
0.98
0.00
1.6
2.1
—
—
—
0
0
(3025271) CD3-CD16+CD56+ (Natural killer) cells [#/volume] in Blood
0
5
0.00
0.00
0.0
3.0
—
0.1
—
0
5
(3019897) Erythrocyte distribution width [Ratio] by Automated count
0
5
0.00
0.00
0.0
1.8
—
13.6
—
0
5

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: R18_URETHRAL_DISCH – Urethral discharge

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).