Balanced rearrangements and structural markers, not elsewhere classified

Q17_BALANC_REARR_STRUCTURAL_MARKERS_NOT_ELSEW_CLASSIFIED

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q95
  • Cause of death: ICD-10 Q95

2 out of 7 registries used, show all original rules.

137

4. Check minimum number of events

None

137

5. Include endpoints

None

137

6. Filter based on genotype QC (FinnGen only)

137

Control definitions (FinnGen only)

Control exclude
Q17_CHROMOSOMAL_ABNORMALITI_NOT_ELSEW_CLASSIFIED

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
Q9
Name in latin
Translocationes aequatae et signacula structuralia sine effectu ad phaenotypum non alibi classificata

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1147 633 509
Only index persons 1063 592 471
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.01
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 27.61 28.64 26.27
Only index persons 28.42 28.93 27.79

-FinnGen-

Key figures

All Female Male
Number of individuals 137 96 41
Unadjusted period prevalence (%) 0.03 0.03 0.02
Median age at first event (years) 31.16 29.02 36.19

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
123
Matched controls
1229
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Q95.0
ICD-10 Finland
Balanced translocation and insertion in normal individual
+∞
104.6
85
*
Z31.5
ICD-10 Finland
Genetic counselling
69.2
70.4
81
33
O35.1
ICD-10 Finland
Maternal care for (suspected) chromosomal abnormality in fetus
29.5
15.2
20
8
Q95.1
ICD-10 Finland
Chromosome inversion in normal individual
+∞
14.9
14
*
N96
ICD-10 Finland
Habitual aborter
156.6
13.7
14
*
Q95.8
ICD-10 Finland
Other balanced rearrangements and structural markers
+∞
10.6
10
*
Z82.7
ICD-10 Finland
Family history of congenital malformations, deformations and chromosomal abnormalities
96.4
8.5
9
*
Q95.2
ICD-10 Finland
Balanced autosomal rearrangement in abnormal individual
+∞
8.4
8
*
MAA10
NOMESCO Finland
Biopsy of chorionic villus
42.5
6.8
8
*
MA4AT
NOMESCO Finland
Chorion biopsy with ultrasound guidance
28.3
6.3
8
*
N46
ICD-10 Finland
Male infertility
28.3
6.3
8
*
MAA00
NOMESCO Finland
Amniocentesis
9.4
6.2
12
14

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(40765089) Chromosome analysis panel - Blood by G-banded
20
9
25.69
14.71
1.0
1.0
—
—
—
0
0
(3013527) Hepatitis B virus core IgM Ab [Presence] in Serum
14
27
5.66
7.13
1.4
1.3
—
—
—
0
0
(40765091) Chromosome analysis panel - Chorionic villus sample by G-banded
6
0
+∞
6.29
1.3
0.0
—
—
—
0
0
(46237023) Hepatitis B virus core and surface Ab and surface Ag panel - Serum
17
48
3.90
5.52
1.8
1.4
—
—
—
0
0
(3021879) Hepatitis B virus core Ab [Presence] in Serum
25
113
2.48
3.69
1.6
1.6
—
—
—
0
0
(3026725) Estradiol (E2) [Moles/volume] in Serum or Plasma
10
32
3.29
2.70
1.9
1.6
nmol/l
0.5
0.5
—
10
27
(3027238) Thyroperoxidase Ab [Units/volume] in Serum or Plasma
23
116
2.18
2.65
1.1
1.3
iu/ml
57.5
121.2
—
6
46
(3044355) Beta 2 glycoprotein 1 IgG Ab [Units/volume] in Serum or Plasma by Immunoassay
8
23
3.63
2.31
1.0
1.3
—
8.6
—
0
10
(3030905) Polymorphonuclear cells [#/volume] in Blood
7
19
3.82
2.18
2.7
2.8
e9/l
4.1
4.1
—
7
19
(3032035) Polymorphonuclear cells/100 leukocytes in Blood
7
19
3.82
2.18
2.7
3.1
%
57.6
55.6
—
7
19
(3019284) Hepatitis B virus surface Ag [Presence] in Serum
52
369
1.66
2.08
2.2
1.7
—
—
—
0
0
(3019497) Choriogonadotropin.beta subunit free [Moles/volume] in Serum or Plasma
6
15
4.13
2.06
1.0
1.3
—
—
—
0
0
(3013139) Helicobacter pylori Ag [Presence] in Stool
14
64
2.32
2.02
1.1
1.1
—
—
—
0
0
(3017143) Hepatitis C virus Ab [Presence] in Serum
32
202
1.76
1.94
1.8
1.6
—
—
—
0
0
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
65
495
1.60
1.93
3.7
4.5
—
—
—
0
0
(3020321) Streptococcus agalactiae [Presence] in Vaginal fluid by Organism specific culture
18
95
2.03
1.86
1.6
1.6
—
—
—
0
0
(3002256) Pathology report gross observation
20
111
1.94
1.80
1.2
1.2
—
—
—
0
0
(3002109) Cholesterol in LDL/Cholesterol in HDL [Mass Ratio] in Serum or Plasma
6
149
0.38
1.77
1.5
1.7
—
—
—
0
0
(4268621)
6
18
3.44
1.76
2.0
2.3
—
—
—
0
0
(46235355) HIV 1 and 2 tests - Meaningful Use set
58
444
1.53
1.62
2.3
2.0
—
—
—
0
0
(21492888) Glucose tolerance 2 hours gestational panel - Serum or Plasma
16
86
1.97
1.58
1.8
1.6
—
—
—
0
0
(3021584) Pregnancy associated plasma protein A [Units/volume] in Serum or Plasma
32
217
1.62
1.49
1.7
1.5
—
—
—
0
0
(3017895) Helicobacter pylori Ab [Units/volume] in Serum
9
38
2.46
1.49
1.7
1.7
—
—
—
0
0
(3018171) Choriogonadotropin [Units/volume] in Serum or Plasma
21
127
1.77
1.47
3.0
2.2
u/l
36934.2
4494.9
—
9
52
(40761511) CBC panel - Blood by Automated count
128
1195
2.08
1.41
9.1
9.7
—
—
—
0
0
(44816559) Phosphatidylethanol [Mass/volume] in Blood
0
40
0.00
1.35
0.0
1.2
—
—
—
0
0
(1002102) Choriogonadotropin.intact+Beta subunit [Mass/volume] in Serum or Plasma
14
77
1.91
1.31
1.6
1.5
—
—
—
0
0
(42870588) Differential panel, method unspecified - Blood
44
332
1.48
1.27
4.8
6.2
—
—
—
0
0
(44816844) Macroprolactin [Units/volume] in Serum or Plasma
6
25
2.46
1.26
1.8
1.2
—
—
—
0
0
(36305247) Microscopic observation [Identifier] in Isolate by Gram stain
5
19
2.69
1.22
1.8
1.3
—
—
—
0
0
(3008486) Thyroxine (T4) free [Moles/volume] in Serum or Plasma
97
854
1.47
1.21
4.1
4.0
pmol/l
14.8
14.3
1.04
88
796
(3000991) Gas panel - Venous blood
12
65
1.93
1.17
15.9
15.3
—
—
—
0
0
(3038177) Helicobacter pylori Ab [Presence] in Serum
5
20
2.55
1.16
1.2
1.1
—
—
—
0
0
(3050129) First trimester maternal screen panel - Serum or Plasma
21
138
1.62
1.11
1.5
1.4
—
—
—
0
0
(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture
14
82
1.79
1.10
2.9
3.0
—
—
—
0
0
(46236098) ABO and Rh group [Type] in Blood by Confirmatory method
32
234
1.48
1.07
1.9
2.3
—
—
—
0
0
(3009201) Thyrotropin [Units/volume] in Serum or Plasma
112
1025
1.51
1.04
4.6
4.4
mu/l
1.7
1.8
0.20
101
969
(4306422)
5
22
2.32
1.04
1.2
1.0
—
—
—
0
0
(3021347) Calcium.ionized [Moles/volume] in Serum or Plasma
45
359
1.38
0.94
7.3
8.1
mmol/l
1.2
1.2
0.08
38
332
(3002032) Base excess in Venous blood by calculation
13
79
1.71
0.92
3.8
5.7
mmol/l
1.5
1.8
0.13
13
63
(36660697) Celiac disease serology panel - Serum
19
129
1.55
0.89
1.3
1.1
—
—
—
0
0
(3013742) Prealbumin [Mass/volume] in Serum or Plasma
12
72
1.73
0.88
2.2
3.1
g/l
0.2
0.2
0.40
12
67
(3004588) Protein electrophoresis panel - Serum or Plasma
6
31
1.98
0.85
1.2
2.1
—
—
—
0
0
(3032080) INR in Blood by Coagulation assay
37
290
1.38
0.85
2.8
6.4
inr
1.0
1.1
1.25
11
92
(3021447) Carbon dioxide [Partial pressure] in Venous blood
13
81
1.67
0.85
3.9
5.6
kpa
6.0
5.9
0.12
13
81
(3042206) Streptococcus agalactiae Ag [Presence] in Vaginal fluid
8
46
1.78
0.84
1.1
1.1
—
—
—
0
0
(40768804) Tissue Pathology biopsy report
48
395
1.33
0.81
1.9
1.9
—
—
—
0
0
(3006093) Chlamydia trachomatis DNA [Presence] in Specimen by NAA with probe detection
28
211
1.41
0.80
2.1
1.8
—
—
—
0
0
(40762366) Oxygen capacity [Volume Fraction] in Arterial blood
6
33
1.85
0.80
7.5
33.1
—
—
—
0
0
(3032836) C peptide [Moles/volume] in Serum or Plasma --fasting
0
25
0.00
0.80
0.0
1.2
—
1.1
—
0
19
(3044640) Blood type and Crossmatch panel - Blood
39
312
1.35
0.79
1.8
2.3
—
—
—
0
0
(3012544) pH of Venous blood
13
83
1.63
0.78
3.9
5.8
—
—
—
0
0
(4010399)
10
59
1.75
0.78
1.2
1.4
—
—
—
0
0
(3019832) Treponema pallidum Ab [Presence] in Serum
40
323
1.34
0.76
1.9
1.7
—
—
—
0
0
(3052851) Hemolysis interference index of Serum or Plasma
5
25
2.04
0.73
2.6
2.8
—
—
—
0
0
(3003694) ABO and Rh group [Type] in Blood
49
410
1.30
0.73
1.9
1.8
—
—
—
0
0
(43534045) MCM6 gene c.-13910C>T and -13915T>G [Identifier] in Blood or Tissue by Molecular genetics method Nominal
13
85
1.58
0.72
1.0
1.0
—
—
—
0
0
(3015816) F5 gene p.Arg506Gln [Presence] in Blood or Tissue by Molecular genetics method
5
26
1.96
0.71
1.0
1.0
—
—
—
0
0
(3036489) Thrombin time
8
49
1.67
0.63
2.1
4.1
s
20.9
20.8
—
8
42
(3002148) Methylenedioxymethamphetamine [Presence] in Urine by Screen method
0
20
0.00
0.61
0.0
1.4
—
—
—
0
0
(3022313) Gas panel - Capillary blood
8
52
1.57
0.60
2.6
5.5
—
—
—
0
0
(3018405) Lactate [Moles/volume] in Arterial blood
0
22
0.00
0.60
0.0
4.9
—
1.4
—
0
22
(3050380) Cytology report of Cervical or vaginal smear or scraping Cyto stain
8
53
1.54
0.59
1.1
1.3
—
—
—
0
0
(3024891) Influenza virus A+B Ag [Presence] in Specimen
6
36
1.70
0.57
1.0
1.4
—
—
—
0
0
(3011371) Neisseria gonorrhoeae DNA [Presence] in Specimen by NAA with probe detection
22
170
1.35
0.56
1.9
1.7
—
—
—
0
0
(3004119) Hemoglobin [Mass/volume] in Venous blood
6
38
1.60
0.55
3.7
4.0
g/l
138.3
131.3
—
6
38
(3001019) Free T4 and TSH panel - Serum or Plasma
6
98
0.59
0.54
2.2
1.8
—
—
—
0
0
(3020460) C reactive protein [Mass/volume] in Serum or Plasma
119
1137
1.35
0.52
11.2
10.7
mg/l
19.5
20.2
0.09
85
835
(3016431) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Serum or Plasma
46
398
1.23
0.50
7.3
8.1
mmol/l
1.2
1.2
0.24
35
342
(3045414) Leukocytes [Presence] in Urine
7
45
1.58
0.50
1.6
1.6
—
—
—
0
0
(586526) SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection
7
49
1.45
0.46
1.4
1.4
—
—
—
0
0
(3030467) Casts [#/volume] in Urine by Automated count
33
278
1.25
0.46
3.1
2.5
e6/l
0.2
0.3
0.57
28
212
(3024354) Oxygen [Partial pressure] in Venous blood
10
69
1.48
0.45
4.3
5.8
kpa
5.1
4.7
—
10
69
(3022145) Colonoscopy Study observation
13
95
1.41
0.45
1.0
1.3
—
—
—
0
0
(3021337) Troponin I.cardiac [Mass/volume] in Serum or Plasma
20
158
1.31
0.45
2.7
3.3
ng/l
733.6
380.8
—
8
88
(3009035) Cobalamin (Vitamin B12) [Moles/volume] in Serum or Plasma
12
161
0.72
0.44
1.0
1.6
pmol/l
385.6
437.7
0.51
12
152
(3002582) Erythrocytes [#/volume] in Urine
36
308
1.23
0.44
3.0
2.6
e6/l
24.8
246.0
0.55
30
241
(3018095) Leukocytes [#/volume] in Urine
43
375
1.21
0.43
3.4
3.0
e6/l
13.9
42.5
1.40
32
255
(3051552) Clostridioides difficile toxin genes [Presence] in Stool by NAA with probe detection
8
56
1.45
0.43
1.1
1.6
—
—
—
0
0
(3010517) Carboxyhemoglobin/Hemoglobin.total in Venous blood
5
31
1.64
0.43
4.2
3.8
%
1.0
1.5
—
5
31
(36031861) Influenza virus A and B and SARS-CoV-2 (COVID-19) and Respiratory syncytial virus RNA panel - Respiratory system specimen by NAA with probe detection
5
32
1.58
0.42
1.2
1.5
—
—
—
0
0
(3044889) 12 lead EKG panel
66
601
1.19
0.42
2.7
2.8
—
—
—
0
0
(3017918) Cytomegalovirus IgG Ab [Titer] in Serum or Plasma
5
33
1.53
0.42
1.2
1.6
—
—
—
0
0
(3038515) Glucose [Moles/volume] in Venous blood
0
15
0.00
0.41
0.0
2.4
—
7.4
—
0
15
(3001405) CD3+CD8+ (T8 suppressor) cells [#/volume] in Blood
0
16
0.00
0.41
0.0
2.4
—
613.2
—
0
11
(3016881) Enterovirus RNA [Presence] in Specimen by NAA with probe detection
0
16
0.00
0.41
0.0
1.9
—
—
—
0
0
(3008037) Lactate [Moles/volume] in Venous blood
0
16
0.00
0.41
0.0
2.3
—
1.2
—
0
16
(3008832) Norclozapine [Moles/volume] in Serum or Plasma
0
16
0.00
0.41
0.0
13.2
—
728.4
—
0
16
(3011412) CD3 cells [#/volume] in Blood
0
16
0.00
0.41
0.0
2.4
—
1.5
—
0
5
(3023183) Ammonium ion [Moles/volume] in Plasma
0
16
0.00
0.41
0.0
6.3
—
46.7
—
0
11
(3000081) cloZAPine [Moles/volume] in Serum or Plasma
0
16
0.00
0.41
0.0
15.0
—
1278.3
—
0
16
(3025271) CD3-CD16+CD56+ (Natural killer) cells [#/volume] in Blood
0
16
0.00
0.41
0.0
2.4
—
0.2
—
0
11
(36032419) SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Immunoassay
8
60
1.35
0.41
1.8
2.1
—
—
—
0
0
(3016293) Bicarbonate [Moles/volume] in Serum or Plasma
8
60
1.35
0.41
7.3
8.5
mmol/l
27.3
24.9
—
8
60
(3015635) Cytomegalovirus IgM Ab [Units/volume] in Serum or Plasma
5
34
1.49
0.41
1.2
1.6
—
—
—
0
0
(3021589) Normoblasts [#/volume] in Blood
56
504
1.19
0.40
7.3
8.0
e9/l
0.0
0.0
0.50
45
410
(3019225) pH of Specimen
10
71
1.44
0.40
2.0
5.0
—
—
—
0
0
(3015916) Alpha-1-Fetoprotein [Units/volume] in Serum or Plasma
0
18
0.00
0.40
0.0
1.6
—
2.8
—
0
13
(3023150) Myeloperoxidase Ab [Units/volume] in Serum
0
18
0.00
0.40
0.0
1.7
—
—
—
0
0
(3009261) Glucose [Presence] in Urine by Test strip
49
546
0.84
0.40
4.7
3.1
estimate
0.0
0.0
0.00
13
107
(3026008) Bacteria identified in Urine by Culture
34
292
1.22
0.40
3.9
2.1
—
—
—
0
0
(3005895) Myoglobin [Mass/volume] in Serum or Plasma
0
19
0.00
0.39
0.0
2.9
—
193.9
—
0
19
(3002434) Lupus erythematosus deoxynucleoproteins IgG Ab [Units/volume] in Serum by Immunoassay
5
36
1.40
0.38
1.2
1.9
—
—
—
0
0
(3021601) Nitrite [Presence] in Urine by Test strip
49
542
0.85
0.36
6.4
4.2
estimate
0.0
0.0
0.50
12
113
(3020059) Calcium [Moles/volume] corrected for albumin in Serum or Plasma
10
133
0.73
0.35
1.7
2.4
mmol/l
2.5
2.4
—
10
115
(3043238) Trisomy 21 risk [Likelihood] in Fetus
13
100
1.33
0.35
1.6
1.5
—
—
—
0
0
(3035350) Ketones [Presence] in Urine by Test strip
49
540
0.86
0.34
4.7
3.0
estimate
0.0
0.0
0.00
12
108
(3037467) Urinalysis macro (dipstick) panel - Urine
83
780
1.16
0.33
4.5
3.6
—
—
—
0
0
(3051714) Fibrin D-dimer FEU [Mass/volume] in Platelet poor plasma
29
250
1.20
0.33
1.9
2.1
mg/l
0.7
0.8
0.15
24
177
(40758558) Short blood count panel - Blood
23
270
0.82
0.32
5.5
6.0
—
—
—
0
0
(3018418) pH of Serum or Plasma
28
242
1.20
0.31
3.3
2.9
ph
7.4
7.4
—
5
42
(3013707) Erythrocyte sedimentation rate by Westergren method
81
763
1.15
0.30
4.2
3.4
mm/h
7.8
8.6
0.29
73
711
(3029937) Albumin [Presence] in Urine by Test strip
25
289
0.83
0.30
5.1
3.1
estimate
0.0
0.0
0.50
13
107
(1761868) Lipid panel - Serum or Plasma
39
433
0.86
0.29
2.1
2.3
—
—
—
0
0
(3018251) Fasting glucose [Moles/volume] in Serum or Plasma
101
968
1.17
0.29
3.0
3.1
mmol/l
5.5
5.6
0.58
88
903
(3001122) Ferritin [Mass/volume] in Serum or Plasma
64
596
1.14
0.28
3.0
2.9
ug/l
66.1
69.5
0.11
59
564
(43054903) Holo-transcobalamin II [Moles/volume] in Serum
26
297
0.85
0.27
1.7
1.8
pmol/l
123.0
93.8
1.20
14
161
(3003191) Choriogonadotropin (pregnancy test) [Presence] in Serum or Plasma
13
104
1.28
0.27
2.4
1.6
—
—
—
0
0
(3018006) Microscopic observation [Identifier] in Cervix by Cyto stain.thin prep
32
284
1.17
0.27
1.6
1.4
—
—
—
0
0
(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection
11
137
0.79
0.25
1.7
1.9
—
—
—
0
0
(3047352) Trisomy 18 risk [Likelihood] in Fetus
12
96
1.27
0.25
1.4
1.4
—
—
—
0
0
(3005033) Fetal Nuchal fold Thickness US
12
96
1.27
0.25
1.4
1.4
—
—
—
0
0
(3005719) IgG [Mass/volume] in Serum or Plasma
6
82
0.72
0.25
5.2
2.6
g/l
10.6
9.9
—
6
73
(3007461) Platelets [#/volume] in Blood
131
1287
1.41
0.25
16.1
15.5
e9/l
260.2
258.3
0.11
125
1259
(36304419) Bacteria [Presence] in Urine
32
286
1.16
0.24
3.2
2.5
—
—
—
0
0
(3003458) Phosphate [Moles/volume] in Serum or Plasma
14
115
1.24
0.24
6.1
7.5
mmol/l
1.1
1.1
0.17
14
110
(3007844) Epstein Barr virus capsid IgM Ab [Units/volume] in Serum by Immunoassay
5
38
1.33
0.23
1.6
1.6
—
—
—
0
0
(40768443) Skin Pathology biopsy report
5
38
1.33
0.23
1.2
1.2
—
—
—
0
0
(3000855) Microscopic observation [Identifier] in Vaginal fluid by Gram stain
5
38
1.33
0.23
1.0
1.4
—
—
—
0
0
(706163) SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection
107
1036
1.15
0.23
4.0
4.0
—
—
—
0
0
(3049207) Fetal Trisomy 21 risk [Likelihood] Based on maternal age
14
117
1.22
0.21
1.5
1.4
—
—
—
0
0
(46235831) Pregnancy associated plasma protein A [Multiple of the median] adjusted in Serum or Plasma
14
117
1.22
0.21
1.5
1.4
—
—
—
0
0
(3008714) Choriogonadotropin [Multiple of the median] adjusted in Serum or Plasma
14
117
1.22
0.21
1.5
1.4
—
—
—
0
0
(40763531) Fetal Nuchal fold [Multiple of the median] Thickness adjusted for maternal weight
14
117
1.22
0.21
1.5
1.4
—
—
—
0
0
(40769539) Bacteria identified based on 16S rRNA gene [Identifier] in Specimen by Sequencing
0
11
0.00
0.21
0.0
1.7
—
—
—
0
0
(3006588) Cancer Ag 15-3 [Units/volume] in Serum or Plasma
0
11
0.00
0.21
0.0
2.0
—
18.8
—
0
11
(40768800) Prostate Pathology biopsy report
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
(3035285) Chloride [Moles/volume] in Venous blood
0
11
0.00
0.21
0.0
2.4
—
106.4
—
0
11
(3033705) Calcium.ionized [Moles/volume] in Venous blood
0
11
0.00
0.21
0.0
2.4
—
—
—
0
0
(3041354) Potassium [Moles/volume] in Venous blood
0
11
0.00
0.21
0.0
2.4
—
4.1
—
0
11
(3011831) Apolipoprotein B/Apolipoprotein A-I [Percentile]
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
(3008364) Apolipoprotein A-I [Mass/volume] in Serum or Plasma
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
(1175426) CD3 cells/100 lymphocytes in Blood
0
10
0.00
0.21
0.0
3.0
—
67.0
—
0
10
(3027831) CD3-CD16+CD56+ (Natural killer) cells/100 cells in Blood
0
10
0.00
0.21
0.0
2.8
—
7.8
—
0
10
(3007449) CD3+CD8+ (T8 suppressor) cells/100 cells in Blood
0
10
0.00
0.21
0.0
2.8
—
23.1
—
0
10
(3003265) Liver kidney microsomal Ab [Titer] in Serum by Immunofluorescence
0
10
0.00
0.21
0.0
1.9
—
—
—
0
0
(3019050) Tissue transglutaminase IgA Ab [Units/volume] in Serum
36
328
1.13
0.21
1.6
1.4
u/ml
2.8
1.2
—
10
78
(3006245) CD3-CD19+ cells/100 cells in Blood
0
12
0.00
0.21
0.0
3.6
—
17.4
—
0
12
(3024666) Lithium, Blood [Moles/volume] in Serum or Plasma
0
12
0.00
0.21
0.0
7.3
—
0.6
—
0
12
(3025023) Rhinovirus RNA [Presence] in Specimen by NAA with probe detection
0
12
0.00
0.21
0.0
2.2
—
—
—
0
0
(3014791) Apolipoprotein B [Mass/volume] in Serum or Plasma
0
12
0.00
0.21
0.0
1.6
—
0.8
—
0
12
(3041096) Erythrocytes [Presence] in Urine by Automated
31
342
0.88
0.21
2.9
2.3
—
—
—
0
0
(44806118)
0
13
0.00
0.21
0.0
2.1
—
—
—
0
0
(44790048)
0
13
0.00
0.21
0.0
2.1
—
—
—
0
0
(3053028) Streptococcus sp identified in Specimen by Organism specific culture
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
(44790047)
0
13
0.00
0.21
0.0
2.1
—
—
—
0
0
(3028167) CD3+CD4+ (T4 helper) cells [#/volume] in Blood
0
13
0.00
0.21
0.0
2.4
—
845.6
—
0
7
(44790049)
0
13
0.00
0.21
0.0
2.1
—
—
—
0
0
(3040363) Hepatitis A virus IgG Ab [Presence] in Serum by Immunoassay
0
13
0.00
0.21
0.0
1.0
—
—
—
0
0
(3013512) EKG study
18
206
0.85
0.19
2.5
2.9
—
—
—
0
0
(43054914) Glucose tolerance 2 hours panel - Serum or Plasma
19
166
1.17
0.19
2.0
2.1
—
—
—
0
0
(3009542) Hematocrit [Volume Fraction] of Blood
114
1113
1.14
0.19
13.4
11.6
%
40.3
40.3
0.06
103
941
(43055554) Base excess.100% oxygenated [Moles/volume] standard in Capillary blood by calculation
7
58
1.22
0.18
4.0
6.1
mmol/l
1.3
0.8
—
7
47
(3019198) Lymphocytes [#/volume] in Blood
61
578
1.10
0.18
6.8
5.8
e9/l
2.1
2.0
0.41
54
523
(3000494) Fungus identified in Specimen by Culture
13
110
1.20
0.18
1.5
1.6
—
—
—
0
0
(3028026) IgM [Mass/volume] in Serum or Plasma
5
66
0.75
0.17
3.2
1.8
g/l
1.1
1.2
—
5
60
(3048929) Epstein Barr virus Ab [Presence] in Serum
8
70
1.15
0.16
1.5
1.5
—
—
—
0
0
(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip
40
428
0.91
0.16
4.7
2.9
—
—
—
0
0
(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma
6
77
0.77
0.16
4.5
5.5
—
—
—
0
0
(3010813) Leukocytes [#/volume] in Blood
131
1291
1.34
0.16
16.1
15.6
e9/l
6.8
6.8
0.12
124
1257
(3026361) Erythrocytes [#/volume] in Blood
131
1290
1.35
0.16
16.1
15.5
e12/l
4.5
4.5
0.50
124
1259
(3023511) Choriogonadotropin [Units/volume] in Urine
9
79
1.15
0.15
2.1
1.2
—
—
—
0
0
(3019550) Sodium [Moles/volume] in Serum or Plasma
109
1065
1.11
0.15
10.3
11.1
mmol/l
139.4
139.5
0.27
102
1031
(3013826) Glucose [Moles/volume] in Serum or Plasma
54
568
0.92
0.15
5.8
5.8
mmol/l
5.9
6.4
1.03
47
502
(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection
8
95
0.83
0.14
1.3
1.7
—
—
—
0
0
(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection
8
95
0.83
0.14
1.3
1.6
—
—
—
0
0
(3001604) Monocytes [#/volume] in Blood
57
545
1.08
0.13
7.1
5.8
e9/l
0.6
0.5
1.04
48
481
(3006315) Basophils [#/volume] in Blood
57
545
1.08
0.13
7.2
5.8
e9/l
0.0
0.0
0.20
48
484
(40761536) Microorganisms panel - Urine sediment
12
104
1.17
0.13
5.2
2.7
—
—
—
0
0
(3041942) Cyclic citrullinated peptide Ab [Units/volume] in Serum
17
189
0.89
0.13
1.2
1.2
u/ml
1.2
7.6
—
6
74
(3004410) Hemoglobin A1c/Hemoglobin.total in Blood
88
856
1.08
0.12
3.4
4.1
mmol/mol
35.7
38.1
1.90
78
819
(3024135) Streptococcus.beta-hemolytic [Presence] in Throat by Organism specific culture
41
388
1.08
0.12
1.8
1.7
—
—
—
0
0
(3019145) Choriogonadotropin.beta subunit free [Mass/volume] in Serum or Plasma
14
124
1.14
0.12
1.8
1.5
—
—
—
0
0
(3033319) Streptococcus pyogenes Ag [Presence] in Throat
22
239
0.91
0.11
1.8
1.6
—
—
—
0
0
(3011397) Hemoglobin [Presence] in Urine by Test strip
21
228
0.91
0.11
6.2
3.5
—
—
—
0
0
(3013650) Neutrophils [#/volume] in Blood by Automated count
62
642
0.94
0.10
6.8
8.8
e9/l
4.1
4.1
0.01
52
559
(3023103) Potassium [Moles/volume] in Serum or Plasma
109
1071
1.09
0.10
10.5
11.1
mmol/l
3.9
3.9
0.19
102
1033
(3006923) Alanine aminotransferase [Enzymatic activity/volume] in Serum or Plasma
117
1153
1.10
0.10
7.9
8.2
u/l
26.0
25.6
0.05
111
1117
(3000330) Specific gravity of Urine by Test strip
5
44
1.14
0.10
2.0
2.1
—
—
—
0
0
(3029287) Urinalysis microscopic panel [#/volume] - Urine by Automated count
36
341
1.08
0.10
4.0
2.9
—
—
—
0
0
(3004490) Bicarbonate [Moles/volume] standard in Capillary blood
5
45
1.12
0.10
2.8
5.6
mmol/l
25.4
24.5
—
5
45
(3029879) Epithelial cells.squamous [#/volume] in Urine by Automated count
16
145
1.12
0.10
2.4
2.4
e6/l
13.4
3.5
0.72
11
71
(40764999) Glomerular filtration rate/1.73 sq M.predicted [Volume Rate/Area] in Serum, Plasma or Blood by Creatinine-based formula (CKD-EPI)
101
993
1.07
0.08
8.9
8.5
ml/min/173m2
97.3
96.3
0.19
76
789
(3048689) Calprotectin [Mass/mass] in Stool
19
176
1.09
0.08
2.1
2.1
ug/g
51.5
73.8
0.39
13
125
(3003510) Neisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection
34
324
1.07
0.08
1.9
2.1
—
—
—
0
0
(3042936) Bacteria identified in Isolate by Culture
12
132
0.90
0.07
1.8
2.3
—
—
—
0
0
(3023368) Bacteria identified in Blood by Culture
20
187
1.08
0.07
3.8
4.7
—
—
—
0
0
(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection
34
354
0.95
0.06
2.0
2.3
—
—
—
0
0
(3025839) Triglyceride [Moles/volume] in Serum or Plasma
24
253
0.94
0.06
1.4
1.7
mmol/l
1.4
1.4
0.04
15
229
(40760892) CBC W Ordered Manual Differential panel - Blood
28
293
0.94
0.05
6.8
4.3
—
—
—
0
0
(3013115) Eosinophils [#/volume] in Blood
58
569
1.03
0.03
7.1
6.1
e9/l
0.2
0.2
0.11
50
509
(3000492) Spirometry study
11
102
1.09
0.03
1.4
1.3
—
—
—
0
0
(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma
98
989
0.97
0.02
3.1
3.3
mmol/l
1.5
1.5
0.00
93
943
(3015736) pH of Urine
42
429
0.97
0.02
4.1
2.8
—
—
—
0
0
(3019800) Troponin T.cardiac [Mass/volume] in Serum or Plasma
29
282
1.04
0.02
1.9
3.2
ng/l
15.5
18.9
0.18
11
134
(3007164) IgA [Mass/volume] in Serum or Plasma
31
302
1.03
0.02
1.7
1.4
g/l
1.4
2.0
1.76
14
187
(3004716) Salmonella sp identified in Stool by Organism specific culture
10
93
1.08
0.02
1.2
1.4
—
—
—
0
0
(40768797) Stomach Pathology biopsy report
12
113
1.07
0.02
1.2
1.2
—
—
—
0
0
(3030306) Epithelial cells.non-squamous [#/volume] in Urine by Automated count
16
156
1.03
0.00
2.5
2.3
e6/l
0.9
0.6
0.47
11
84
(21494755) Public health laboratory ask at order entry panel
18
176
1.03
0.00
1.1
1.3
—
—
—
0
0
(3001308) Cholesterol in LDL [Moles/volume] in Serum or Plasma
100
998
1.01
0.00
3.2
3.5
mmol/l
3.0
2.8
1.80
92
949
(3019900) Cholesterol [Moles/volume] in Serum or Plasma
99
993
0.99
0.00
3.1
3.3
mmol/l
4.8
4.6
1.05
93
950
(3021614) Rheumatoid factor [Units/volume] in Serum or Plasma
18
182
0.99
0.00
1.3
1.3
iu/ml
7.6
23.9
—
7
51
(3036481) Cortisol [Moles/volume] in Serum or Plasma
12
115
1.05
0.00
1.7
1.8
nmol/l
369.1
389.7
0.18
12
105
(3005791) Eosinophil cationic protein (ECP) [Mass/volume] in Serum
0
5
0.00
0.00
0.0
3.2
—
16.0
—
0
5
(3044242) Glucose [Moles/volume] in Arterial blood
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3043405) Microscopic observation [Identifier] in Specimen by Non-gynecological cytology method
0
9
0.00
0.00
0.0
1.3
—
—
—
0
0
(3010503) CD19 cells [#/volume] in Blood
0
7
0.00
0.00
0.0
1.4
—
0.3
—
0
7
(1001509) Gas and Carbon monoxide and Electrolytes panel - Arterial blood
0
6
0.00
0.00
0.0
2.2
—
—
—
0
0
(4281824)
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3045156) Carbon dioxide [Partial pressure] adjusted to patient's actual temperature in Arterial blood
0
6
0.00
0.00
0.0
2.2
—
—
—
0
0
(43055089) Myosin Ab [Presence] in Serum or Plasma by Immunoblot
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3006462) Nitrate [Presence] in Urine
0
6
0.00
0.00
0.0
2.5
—
—
—
0
0
(3035320) C reactive protein [Mass/volume] in Body fluid
0
9
0.00
0.00
0.0
1.4
—
—
—
0
0
(40760888) Immunoglobulin light chains.free panel - Serum
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
(40760848) Basement membrane zone BP180 Ab [Units/volume] in Serum by Immunoassay
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3010254) Herpes simplex virus identified in Specimen by Organism specific culture
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(42868647) JC virus Ab [Presence] in Serum or Plasma by Immunoassay
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting
94
940
1.00
0.00
2.8
3.1
mmol/l
1.2
1.2
0.32
88
891
(3022411) Androstenedione [Moles/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.4
—
9.0
—
0
5
(3012158) Parainfluenza virus 2 RNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
2.0
—
—
—
0
0
(44816808) CXCL13 Ag [Mass/volume] in Cerebral spinal fluid
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(36305771) Cryptosporidium sp DNA [Presence] in Stool by NAA with probe detection
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3009595) Pneumocystis jiroveci DNA [Presence] in Specimen by NAA with probe detection
0
9
0.00
0.00
0.0
2.1
—
—
—
0
0
(3000108) Respiratory syncytial virus B RNA [Presence] in Specimen by NAA with probe detection
0
6
0.00
0.00
0.0
2.2
—
—
—
0
0
(3025378) Microscopic observation [Identifier] in Cervix by Cyto stain
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(42868414) European tick borne encephalitis virus IgM Ab [Presence] in Serum by Immunoassay
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
(3006262) Parainfluenza virus 3 RNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
2.0
—
—
—
0
0
(3038546) Human coronavirus OC43 RNA [Presence] in Specimen by NAA with probe detection
0
9
0.00
0.00
0.0
1.8
—
—
—
0
0
(40762485) Glomerular basement membrane Ab [Units/volume] in Serum by Immunoassay
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
(3049506) Microalbumin [Mass/time] in Urine collected for unspecified duration
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3005570) Glucose [Moles/volume] in Urine
0
9
0.00
0.00
0.0
1.6
—
—
—
0
0
(3036048) Francisella tularensis Ab [Titer] in Serum
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(40768795) Lymph node Pathology biopsy report
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
(42870308) Desmosome IgG Ab [Titer] in Serum by Immunofluorescence
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3013201) Beta-2-Microglobulin [Mass/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
1.3
—
2.1
—
0
6
(42870298) TPMT gene c.238G>C+460G>A+719A>G [Identifier] in Blood or Tissue by Molecular genetics method Narrative
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3011391) Calcitriol [Moles/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(40758990) Choriogonadotropin.beta subunit [Mass/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(4211845)
0
6
0.00
0.00
0.0
2.5
—
—
—
0
0
(3029080) Hemoglobin [Entitic mass] in Reticulocytes
0
6
0.00
0.00
0.0
1.0
—
33.0
—
0
6
(21494670) JAK2 gene exon 14 targeted mutation analysis in Blood or Tissue by Molecular genetics method
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
(3012202) Varicella zoster virus DNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
(3007853) Bacteria identified in Skin by Aerobe culture
12
120
1.00
0.00
3.2
1.6
—
—
—
0
0
(3005011) Chlamydia sp Ab [Titer] in Serum
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
(3000093) Morphology [Interpretation] in Blood Narrative
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(21493195) Respiratory pathogens DNA and RNA tested for in Respiratory system specimen by NAA with probe detection
0
6
0.00
0.00
0.0
2.2
—
—
—
0
0
(3009871) Measles virus Ab [Titer] in Serum
0
6
0.00
0.00
0.0
2.0
—
—
—
0
0
(1617658) Protocol used for examination of sentinel lymph nodes
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3022621) pH of Urine by Test strip
6
63
0.95
0.00
1.7
2.6
—
—
—
0
0
(3041642) Human coronavirus 229E RNA [Presence] in Specimen by NAA with probe detection
0
9
0.00
0.00
0.0
1.8
—
—
—
0
0
(40758292) HTLV I+II Ab panel - Serum
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
(3005156) Respiratory syncytial virus A RNA [Presence] in Specimen by NAA with probe detection
0
6
0.00
0.00
0.0
2.2
—
—
—
0
0
(40768441) Liver Pathology biopsy report
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(3022803) Oxygen [Partial pressure] adjusted to patient's actual temperature in Arterial blood
0
6
0.00
0.00
0.0
2.2
—
—
—
0
0
(3025634) Parainfluenza virus 1 RNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
2.0
—
—
—
0
0
(3005322) IgE [Units/volume] in Serum or Plasma
8
81
0.99
0.00
2.1
1.2
u/ml
257.9
95.0
—
8
70
(3028433) Virus identified in Specimen by Culture
0
6
0.00
0.00
0.0
1.7
—
—
—
0
0
(3038297) Parainfluenza virus 4 RNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
2.0
—
—
—
0
0
(40757349) CD3+CD4+ (T4 helper) cells/CD3+CD8+ (T8 suppressor cells) cells [# Ratio] in Blood
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
(40760847) Basement membrane Ab [Titer] in Serum by Immunofluorescence
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(44816752) ERBB2 gene copy number/nucleus in Tissue by FISH
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(42529200) Cancer Ag 15-3 [Units/volume] in Serum or Plasma by Immunoassay
0
9
0.00
0.00
0.0
4.4
—
27.3
—
0
9
(3030429) Borrelia sp DNA [Identifier] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3018559) Microscopic observation [Identifier] in Buccal smear by Cyto stain
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3040359) Human coronavirus NL63 RNA [Presence] in Specimen by NAA with probe detection
0
9
0.00
0.00
0.0
1.8
—
—
—
0
0
(3051651) Icteric interference index of Serum or Plasma
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint Q17_BALANC_REARR_STRUCTURAL_MARKERS_NOT_ELSEW_CLASSIFIED and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have Q17_BALANC_REARR_STRUCTURAL_MARKERS_NOT_ELSEW_CLASSIFIED.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: Q17_BALANC_REARR_STRUCTURAL_MARKERS_NOT_ELSEW_CLASSIFIED – Balanced rearrangements and structural markers, not elsewhere classified

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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