Hypertrophy of bone

M13_BONEHYPERTRPH

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 M89.3
  • Cause of death: ICD-10 M89.3

2 out of 7 registries used, show all original rules.

114

4. Check minimum number of events

None

114

5. Include endpoints

None

114

6. Filter based on genotype QC (FinnGen only)

114

Control definitions (FinnGen only)

Control exclude
M13_OSTEOCHONDRO

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
M89
Name in latin
Hypertrophia ossis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 932 474 453
Only index persons 900 464 436
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 41.88 43.81 40.03
Only index persons 41.76 43.39 40.02

-FinnGen-

Key figures

All Female Male
Number of individuals 114 69 45
Unadjusted period prevalence (%) 0.02 0.02 0.02
Median age at first event (years) 42.27 38.91 47.41

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
101
Matched controls
1010
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
M89.3
ICD-10 Finland
Hypertrophy of bone
+∞
145.6
101
*
NHK10
NOMESCO Finland
Incision or excision of metatarsal or tarsal bone
216.2
18.1
18
*
NHK99
NOMESCO Finland
Other operation on bone of ankle or foot
76.9
17.4
19
*
N02BE01
ATC
paracetamol; systemic, rectal
5.0
6.5
93
706

Mortality – FinRegistry

Association

Association between endpoint M13_BONEHYPERTRPH and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have M13_BONEHYPERTRPH.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: M13_BONEHYPERTRPH – Hypertrophy of bone

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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