Localized skin eruption due to drugs and medicaments

LOCALIZED_SKIN_ERUPT_DRUGS_MEDICAM

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L27.1#

1 out of 7 registries used, show all original rules.

401

4. Check minimum number of events

None

401

5. Include endpoints

None

401

6. Filter based on genotype QC (FinnGen only)

401

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
C
First used in FinnGen datafreeze
DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2626 1498 1115
Only index persons 2347 1368 979
Unadjusted period prevalence (%)
Whole population 0.04 0.04 0.03
Only index persons 0.04 0.05 0.04
Median age at first event (years)
Whole population 51.43 54.02 47.91
Only index persons 52.21 54.10 49.55

-FinnGen-

Key figures

All Female Male
Number of individuals 401 257 144
Unadjusted period prevalence (%) 0.08 0.09 0.06
Median age at first event (years) 54.76 52.84 58.19

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
347
Matched controls
3469
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
L27.1
ICD-10 Finland
Localized skin eruption due to drugs and medicaments
4503599627370496.0
323.0
346
*
H02AB06
ATC
prednisolone; systemic
4.6
38.8
239
1126
Z01.5
ICD-10 Finland
Diagnostic skin and sensitization tests
5.3
23.1
77
178
XQ800
NOMESCO Finland
Prick test
4.8
17.9
63
152
L30.9
ICD-10 Finland
Dermatitis, unspecified
3.5
17.9
99
359
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
4.4
15.1
57
147
R06AE07
ATC
cetirizine; oral
2.5
14.5
184
1089
D07AC01
ATC
betamethasone; topical
2.5
14.3
149
792
E0000UV
ATC
NA
2.4
13.5
169
982
GD1AA
NOMESCO Finland
Thorax X-ray examination
2.4
12.9
167
981
XQ820
NOMESCO Finland
Exposure to medicinal substance
72.5
12.7
14
*
L27.0
ICD-10 Finland
Generalized skin eruption due to drugs and medicaments
13.1
12.3
21
17
H02AB02
ATC
dexamethasone; systemic
3.6
11.9
56
176
N02AX02
ATC
tramadol; systemic, rectal
2.2
11.3
162
976
R06AX27
ATC
desloratadine; oral
2.4
11.0
118
616
R06AE09
ATC
levocetirizine; oral
2.8
10.0
68
275
J01AA02
ATC
doxycycline; systemic
2.3
9.7
274
2155
XQ802
NOMESCO Finland
Epicutan test
4.5
9.7
34
82
A03FA01
ATC
metoclopramide; systemic, rectal
2.4
9.7
89
429
A02BC02
ATC
pantoprazole; systemic
2.1
9.5
231
1696
J01MA02
ATC
ciprofloxacin; systemic
2.1
9.5
145
879
J01DB01
ATC
cefalexin; oral
2.4
9.2
296
2441
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
2.2
8.9
115
645
A02BC05
ATC
esomeprazole; systemic
2.0
8.8
153
969
J20.9
ICD-10 Finland
Acute bronchitis, unspecified
2.5
8.8
77
359
A49.9
ICD-10 Finland
Bacterial infection, unspecified
3.2
8.7
48
168
J01FF01
ATC
clindamycin; systemic
2.1
8.1
105
585
UJF32
NOMESCO Finland
Coloscopy
2.1
7.7
101
564
XQ801
NOMESCO Finland
Intracutantest
18.9
7.6
11
6
R50.9
ICD-10 Finland
Fever, unspecified
2.5
7.6
62
277
UDC00
NOMESCO Finland
Ear microscopy
3.3
7.6
38
126
XX3DW
NOMESCO Finland
Time consuming IT work
3.0
7.4
42
152
L03AA13
ATC
pegfilgrastim; parenteral
4.8
7.3
23
50
D07AB02
ATC
hydrocortisone butyrate; topical
2.0
7.2
107
631
J01MA12
ATC
levofloxacin; systemic
2.2
7.1
75
380
A04AA02
ATC
granisetron; systemic, transdermal
3.7
7.1
30
87
S01XA20
ATC
artificial tears and other indifferent preparations; ophthalmic
1.9
7.0
140
915
T78.4
ICD-10 Finland
Allergy, unspecified
4.0
6.9
26
68
N10
ICD-10 Finland
Acute tubulo-interstitial nephritis
2.5
6.9
53
230
J02AC01
ATC
fluconazole; systemic
1.9
6.9
152
1027
J01FA09
ATC
clarithromycin; systemic
1.9
6.6
122
771
L50.9
ICD-10 Finland
Urticaria, unspecified
4.2
6.5
23
57
D07BA04
ATC
hydrocortisone and antiseptics; topical
2.6
6.4
47
198
N03AX16
ATC
pregabalin; oral
2.0
6.4
90
516
K12.00
ICD-10 Finland
Recurrent oral aphthae
9.5
6.3
12
13
ZX120
NOMESCO Finland
Intravenous
2.8
6.3
40
156
D07AD01
ATC
clobetasol; topical
2.2
6.2
63
313
N48.1
ICD-10 Finland
Balanoposthitis
5.9
6.2
16
28
D07AC13
ATC
mometasone; topical
1.9
6.2
106
652
D70.82
ICD-10 Finland
Drug-induced neutropenia
7.9
6.2
13
17
WZC20
NOMESCO Finland
Multidisciplinary treatment meeting
4.0
6.1
23
61
SPAT1223
SPAT
Implementation of physical therapy rehabilitation plan
1.9
6.1
105
645
L50.0
ICD-10 Finland
Allergic urticaria
5.7
6.1
16
29
J01DA01
ATC
[U] cefalexin; systemic
1.8
6.1
216
1678

Mortality – FinRegistry

Association

Association between endpoint LOCALIZED_SKIN_ERUPT_DRUGS_MEDICAM and mortality.

Females

Parameter HR [95% CI] p-value
LOCALIZED_SKIN_ERUPT_DRUGS_MEDICAM 1.557 [1.26, 1.93] < 0.001
Birth year 0.998 [0.99, 1.01] 0.626

During the follow-up period (1.1.1998 — 31.12.2019), 246 out of 1248 females with LOCALIZED_SKIN_ERUPT_DRUGS_MEDICAM died.

Males

Parameter HR [95% CI] p-value
LOCALIZED_SKIN_ERUPT_DRUGS_MEDICAM 1.561 [1.26, 1.93] < 0.001
Birth year 0.99 [0.98, 1.0] 0.027

During the follow-up period (1.1.1998 — 31.12.2019), 181 out of 969 males with LOCALIZED_SKIN_ERUPT_DRUGS_MEDICAM died.

Mortality risk

Mortality risk for people of age

years, who have LOCALIZED_SKIN_ERUPT_DRUGS_MEDICAM.

N-year risk Females Males
1 0.143% 0.415%
5 1.089% 2.227%
10 2.717% 5.267%
15 4.883% 9.734%
20 8.541% 15.853%

Relationships between endpoints

Index endpoint: LOCALIZED_SKIN_ERUPT_DRUGS_MEDICAM – Localized skin eruption due to drugs and medicaments

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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