This is a non-core endpoint: only basic statistics are computed.
Actinic granuloma
L12_ACTINICGRAN
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
5 |
4. Check minimum number of eventsNone |
5 |
5. Include endpointsNone |
5 |
6. Filter based on genotype QC (FinnGen only) |
5 |
Control definitions (FinnGen only)
- Control exclude
- L12_RADIATIONRELATEDSKIN
Extra metadata
- Level in the ICD hierarchy
- 4
- First used in FinnGen datafreeze
- DF2
- Parent code in ICD-10
- L57
- Name in latin
- Granuloma actinicum
Similar endpoints
↥List of similar endpoints to
Actinic granuloma
based on the number of shared cases.
Similar with more cases:
- Skin changes due to chronic exposure to nonionizing radiation
- Radiation-related disorders of the skin and subcutaneous tissue
- Other disorders of skin and subcutaneous tissue
- Diseases of the skin and subcutaneous tissue
- Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 29 | 14 | 14 |
| Only index persons | 26 | 14 | 12 |
| Unadjusted period prevalence (%) | |||
| Whole population | 0.00 | 0.00 | 0.00 |
| Only index persons | 0.00 | 0.00 | 0.00 |
| Median age at first event (years) | |||
| Whole population | 58.27 | 52.64 | 62.60 |
| Only index persons | 57.24 | 52.64 | 62.60 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 5 | - | - |
| Unadjusted period prevalence (%) | 0.00 | - | - |
| Median age at first event (years) | 51.59 | - | - |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
No data
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3037467) Urinalysis macro (dipstick) panel - Urine
5
28
+∞
1.12
3.0
6.1
—
—
—
0
0
(3008486) Thyroxine (T4) free [Moles/volume] in Serum or Plasma
5
34
+∞
0.51
4.0
4.7
pmol/l
14.4
14.8
—
5
29
(3031040) Bacteria [#/volume] in Urine by Automated count
5
33
+∞
0.51
3.0
4.7
—
—
—
0
0
(3018418) pH of Serum or Plasma
0
13
0.00
0.49
0.0
6.5
—
7.4
—
0
7
(40758558) Short blood count panel - Blood
0
11
0.00
0.24
0.0
5.0
—
—
—
0
0
(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection
0
11
0.00
0.24
0.0
1.2
—
—
—
0
0
(3024135) Streptococcus.beta-hemolytic [Presence] in Throat by Organism specific culture
0
11
0.00
0.24
0.0
1.5
—
—
—
0
0
(3033658) Prothrombin time (PT) actual/Normal
0
10
0.00
0.24
0.0
4.2
—
86.3
—
0
10
(3019284) Hepatitis B virus surface Ag [Presence] in Serum
0
10
0.00
0.24
0.0
1.4
—
—
—
0
0
(3018006) Microscopic observation [Identifier] in Cervix by Cyto stain.thin prep
0
10
0.00
0.24
0.0
1.0
—
—
—
0
0
(3020460) C reactive protein [Mass/volume] in Serum or Plasma
5
43
+∞
0.00
27.0
17.0
mg/l
9.0
12.1
—
5
33
(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture
0
8
0.00
0.00
0.0
4.9
—
—
—
0
0
(3006093) Chlamydia trachomatis DNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3042936) Bacteria identified in Isolate by Culture
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3005322) IgE [Units/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
1.0
—
42.2
—
0
6
(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3022621) pH of Urine by Test strip
0
7
0.00
0.00
0.0
1.6
—
—
—
0
0
(3017143) Hepatitis C virus Ab [Presence] in Serum
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3009201) Thyrotropin [Units/volume] in Serum or Plasma
5
42
+∞
0.00
5.4
5.7
mu/l
2.1
2.0
—
5
36
(3022145) Colonoscopy Study observation
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3048816) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Blood
0
8
0.00
0.00
0.0
8.9
—
1.2
—
0
8
(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(40761536) Microorganisms panel - Urine sediment
0
6
0.00
0.00
0.0
3.7
—
—
—
0
0
(3020564) Creatinine [Moles/volume] in Serum or Plasma
5
45
+∞
-0.00
25.0
18.8
umol/l
96.2
86.5
—
5
45
Mortality – FinRegistry
↥Association
Association between endpoint L12_ACTINICGRAN and mortality.
Females
No dataMales
No dataMortality risk
Mortality risk for people of age
years, who have L12_ACTINICGRAN.| N-year risk | Females | Males |
|---|---|---|
| 1 | No data | No data |
| 5 | No data | No data |
| 10 | No data | No data |
| 15 | No data | No data |
| 20 | No data | No data |
Relationships between endpoints
↥Index endpoint: L12_ACTINICGRAN – Actinic granuloma
GWS hits: -
Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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