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This is a non-core endpoint: only basic statistics are computed.

Congenital dyserythropoietic anaemia

D3_CONGENDYSERYTHANAEMIA

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D64.4
  • Cause of death: ICD-10 D64.4

2 out of 7 registries used, show all original rules.

25

4. Check minimum number of events

None

25

5. Include endpoints

None

25

6. Filter based on genotype QC (FinnGen only)

25

Control definitions (FinnGen only)

Control exclude
D3_APLASTICANDOTHANAEMIA

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
D64
Name in latin
Anaemia dyserythropoetica congenita

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 242 127 112
Only index persons 165 97 68
Unadjusted period prevalence (%)
Whole population 0.00 0.00 0.00
Only index persons 0.00 0.00 0.00
Median age at first event (years)
Whole population 70.67 72.38 68.67
Only index persons 65.83 66.47 64.92

-FinnGen-

Key figures

All Female Male
Number of individuals 25 11 14
Unadjusted period prevalence (%) 0.01 0.00 0.01
Median age at first event (years) 59.51 50.09 66.91

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3016251) Hemoglobin.gastrointestinal [Presence] in Stool
6
7
10.76
3.46
3.8
2.9
—
—
—
0
0
(3022250) Lactate dehydrogenase [Enzymatic activity/volume] in Serum or Plasma by Lactate to pyruvate reaction
6
16
4.58
2.07
6.7
3.1
u/l
222.3
261.9
—
6
16
(3000991) Gas panel - Venous blood
5
12
4.91
1.92
5.0
4.0
—
—
—
0
0
(3042936) Bacteria identified in Isolate by Culture
7
24
3.64
1.89
2.4
1.9
—
—
—
0
0
(3025839) Triglyceride [Moles/volume] in Serum or Plasma
0
44
0.00
1.72
0.0
1.4
—
1.3
—
0
36
(40758558) Short blood count panel - Blood
11
53
2.92
1.70
10.8
6.4
—
—
—
0
0
(3022145) Colonoscopy Study observation
5
15
3.89
1.60
1.4
1.3
—
—
—
0
0
(3048816) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Blood
5
15
3.89
1.60
1.6
6.5
mmol/l
1.2
1.2
—
5
15
(3026782) Osmolality of Urine
9
41
2.85
1.58
5.9
2.6
mosm/kgh2o
521.7
512.7
—
9
34
(42870588) Differential panel, method unspecified - Blood
12
65
2.63
1.45
8.4
5.6
—
—
—
0
0
(3015736) pH of Urine
13
75
2.53
1.37
4.5
4.3
—
—
—
0
0
(40760892) CBC W Ordered Manual Differential panel - Blood
8
38
2.61
1.34
7.0
6.9
—
—
—
0
0
(36304419) Bacteria [Presence] in Urine
11
59
2.54
1.33
4.7
2.4
—
—
—
0
0
(3007853) Bacteria identified in Skin by Aerobe culture
5
20
2.86
1.21
1.6
1.6
—
—
—
0
0
(3029287) Urinalysis microscopic panel [#/volume] - Urine by Automated count
12
70
2.37
1.20
6.0
3.0
—
—
—
0
0
(3009508) Creatinine [Moles/volume] in Urine
10
56
2.31
1.07
3.5
2.7
mmol/l
5.3
8.4
—
5
43
(3044889) 12 lead EKG panel
16
115
2.08
1.02
5.1
4.2
—
—
—
0
0
(3018095) Leukocytes [#/volume] in Urine
12
75
2.15
0.98
9.3
2.9
e6/l
32.9
33.1
0.00
12
56
(3041096) Erythrocytes [Presence] in Urine by Automated
9
56
1.94
0.85
6.6
3.5
—
—
—
0
0
(3015377) Calcium [Moles/volume] in Serum or Plasma
10
63
1.98
0.76
4.4
3.2
mmol/l
2.3
2.3
—
10
58
(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip
11
74
1.87
0.68
7.7
5.0
—
—
—
0
0
(3023368) Bacteria identified in Blood by Culture
9
58
1.86
0.66
6.1
4.5
—
—
—
0
0
(3017143) Hepatitis C virus Ab [Presence] in Serum
0
20
0.00
0.63
0.0
1.5
—
—
—
0
0
(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection
0
19
0.00
0.63
0.0
1.4
—
—
—
0
0
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
10
70
1.71
0.52
4.0
4.9
—
—
—
0
0
(3026910) Gamma glutamyl transferase [Enzymatic activity/volume] in Serum or Plasma
14
108
1.67
0.51
2.6
2.7
u/l
48.9
45.6
0.08
14
101
(3016771) Amylase [Enzymatic activity/volume] in Serum or Plasma
8
55
1.66
0.50
2.0
2.4
u/l
60.1
54.6
—
8
50
(3044640) Blood type and Crossmatch panel - Blood
8
56
1.63
0.49
4.0
2.1
—
—
—
0
0
(3006140) Bilirubin.total [Moles/volume] in Serum or Plasma
12
91
1.61
0.45
6.8
7.5
umol/l
13.2
14.4
0.11
12
83
(4010399)
0
16
0.00
0.42
0.0
1.2
—
—
—
0
0
(3004410) Hemoglobin A1c/Hemoglobin.total in Blood
19
164
1.66
0.42
10.9
6.7
mmol/mol
44.6
41.5
0.36
19
147
(3003510) Neisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection
0
17
0.00
0.42
0.0
1.3
—
—
—
0
0
(3008230) Borrelia burgdorferi IgM Ab [Units/volume] in Serum
0
17
0.00
0.42
0.0
2.6
—
—
—
0
0
(3013826) Glucose [Moles/volume] in Serum or Plasma
14
112
1.57
0.41
5.7
3.8
mmol/l
7.6
6.8
0.43
14
103
(3011397) Hemoglobin [Presence] in Urine by Test strip
6
42
1.56
0.39
6.7
5.2
—
—
—
0
0
(46236098) ABO and Rh group [Type] in Blood by Confirmatory method
5
37
1.44
0.25
4.4
2.2
—
—
—
0
0
(3003694) ABO and Rh group [Type] in Blood
6
48
1.33
0.22
1.3
1.5
—
—
—
0
0
(3021879) Hepatitis B virus core Ab [Presence] in Serum
0
11
0.00
0.22
0.0
1.6
—
—
—
0
0
(46235759) Influenza virus B RNA [Presence] in Nasopharynx by NAA with probe detection
0
11
0.00
0.22
0.0
1.7
—
—
—
0
0
(3044254) Respiratory syncytial virus RNA [Presence] in Specimen by NAA with probe detection
0
10
0.00
0.22
0.0
1.9
—
—
—
0
0
(3003031) Transferrin.carbohydrate deficient.disialo/Transferrin.total in Serum or Plasma
0
12
0.00
0.21
0.0
1.5
—
1.4
—
0
12
(3019225) pH of Specimen
0
14
0.00
0.20
0.0
4.4
—
—
—
0
0
(3026008) Bacteria identified in Urine by Culture
7
59
1.26
0.20
7.0
3.2
—
—
—
0
0
(3037467) Urinalysis macro (dipstick) panel - Urine
15
132
1.34
0.20
6.3
4.7
—
—
—
0
0
(40761511) CBC panel - Blood by Automated count
20
185
1.40
0.20
24.6
14.7
—
—
—
0
0
(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting
18
163
1.37
0.18
3.8
3.9
mmol/l
1.3
1.2
0.24
18
146
(3013512) EKG study
7
64
1.13
0.09
7.4
4.2
—
—
—
0
0
(40768804) Tissue Pathology biopsy report
6
72
0.78
0.09
2.7
2.0
—
—
—
0
0
(3021347) Calcium.ionized [Moles/volume] in Serum or Plasma
8
74
1.12
0.09
8.6
4.8
mmol/l
1.2
1.2
—
8
68
(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma
18
172
1.17
0.08
3.9
4.2
mmol/l
1.2
1.4
1.03
18
155
(706163) SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection
11
109
1.02
0.00
2.3
2.7
—
—
—
0
0
(3010521) Mycoplasma pneumoniae IgM Ab [Presence] in Serum by Immunoassay
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
(40768793) Breast Pathology biopsy report
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3018171) Choriogonadotropin [Units/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(36305247) Microscopic observation [Identifier] in Isolate by Gram stain
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
(3052851) Hemolysis interference index of Serum or Plasma
0
5
0.00
0.00
0.0
4.4
—
—
—
0
0
(3018387) Mycoplasma pneumoniae IgG Ab [Units/volume] in Serum
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3018251) Fasting glucose [Moles/volume] in Serum or Plasma
18
175
1.10
0.00
6.3
4.7
mmol/l
6.2
6.0
0.22
18
155
(3018405) Lactate [Moles/volume] in Arterial blood
0
8
0.00
0.00
0.0
3.3
—
1.1
—
0
8
(3050380) Cytology report of Cervical or vaginal smear or scraping Cyto stain
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(37019628) Gastrointestinal bacterial pathogens panel - Stool by NAA with probe detection
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3008898) HLA-B27 [Presence]
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3019900) Cholesterol [Moles/volume] in Serum or Plasma
18
174
1.12
0.00
4.1
4.2
mmol/l
4.0
4.4
0.92
18
156
(40768800) Prostate Pathology biopsy report
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3001308) Cholesterol in LDL [Moles/volume] in Serum or Plasma
18
180
1.00
0.00
5.1
4.8
mmol/l
2.2
2.6
0.88
18
161
(3005570) Glucose [Moles/volume] in Urine
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(36660697) Celiac disease serology panel - Serum
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3048821) Cortisol [Moles/volume] in Serum or Plasma --post 1 mg dexamethasone PO overnight
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3021584) Pregnancy associated plasma protein A [Units/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
(3001019) Free T4 and TSH panel - Serum or Plasma
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
(3004451) EKG impression Narrative
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3027545) Mycoplasma pneumoniae Ab [Presence] in Serum by Immunoassay
0
7
0.00
0.00
0.0
1.7
—
—
—
0
0
(1002224) Polysomnography panel
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3043109) Cytology report of Tissue fine needle aspirate Cyto stain
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(1761868) Lipid panel - Serum or Plasma
6
60
1.00
0.00
2.0
3.2
—
—
—
0
0
(1175715) Chlamydophila pneumoniae IgM Ab [Presence] in Serum by Immunoassay
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint D3_CONGENDYSERYTHANAEMIA and mortality.

Females

Parameter HR [95% CI] p-value
D3_CONGENDYSERYTHANAEMIA 2.533 [1.71, 3.76] < 0.001
Birth year 0.994 [0.99, 1.0] 0.187

During the follow-up period (1.1.1998 — 31.12.2019), 68 out of 123 females with D3_CONGENDYSERYTHANAEMIA died.

Males

No data

Mortality risk

Mortality risk for people of age

years, who have D3_CONGENDYSERYTHANAEMIA.

N-year risk Females Males
1 0.3% No data
5 1.5% No data
10 3.515% No data
15 6.704% No data
20 11.991% No data

Relationships between endpoints

Index endpoint: D3_CONGENDYSERYTHANAEMIA – Congenital dyserythropoietic anaemia

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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