This is a non-core endpoint: only basic statistics are computed.
Paracoccidioidomycosis
AB1_PARACOCCIDIOIDOMYCOSIS
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
6 |
4. Check minimum number of eventsNone |
6 |
5. Include endpointsNone |
6 |
6. Filter based on genotype QC (FinnGen only) |
6 |
Control definitions (FinnGen only)
- Control exclude
- AB1_MYCOSES
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF5
Similar endpoints
↥List of similar endpoints to
Paracoccidioidomycosis
based on the number of shared cases.
Similar with more cases:
- Mycoses
- Certain infectious and parasitic diseases
- Cardiovascular diseases (excluding rheumatic etc)
- Cardiovascular diseases
- Any reimbursement code in KELA
Similar with less cases:
None
Case counts by codes
↥FinnGen case counts by registry codes:
Not enough data for upset plot.
Not enough data for upset table.
Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 42 | 14 | 28 |
| Only index persons | 37 | 13 | 24 |
| Unadjusted period prevalence (%) | |||
| Whole population | 0.00 | 0.00 | 0.00 |
| Only index persons | 0.00 | 0.00 | 0.00 |
| Median age at first event (years) | |||
| Whole population | - | 66.29 | 61.25 |
| Only index persons | 61.13 | 60.91 | 61.25 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 6 | - | 5 |
| Unadjusted period prevalence (%) | 0.00 | - | 0.00 |
| Median age at first event (years) | 73.30 | - | 73.62 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
No data
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection
0
11
0.00
0.24
0.0
2.0
—
—
—
0
0
(1761868) Lipid panel - Serum or Plasma
0
12
0.00
0.23
0.0
4.9
—
—
—
0
0
(40768797) Stomach Pathology biopsy report
0
9
0.00
0.23
0.0
1.9
—
—
—
0
0
(3051552) Clostridioides difficile toxin genes [Presence] in Stool by NAA with probe detection
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection
0
6
0.00
0.00
0.0
2.7
—
—
—
0
0
(43054914) Glucose tolerance 2 hours panel - Serum or Plasma
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(4010399)
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(3022145) Colonoscopy Study observation
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(4035726)
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3022217) INR in Platelet poor plasma by Coagulation assay
0
7
0.00
0.00
0.0
59.7
—
—
—
0
0
(3003785) Carcinoembryonic Ag [Mass/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
5.1
—
21.7
—
0
7
(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture
0
8
0.00
0.00
0.0
3.9
—
—
—
0
0
(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection
0
5
0.00
0.00
0.0
2.4
—
—
—
0
0
(3022250) Lactate dehydrogenase [Enzymatic activity/volume] in Serum or Plasma by Lactate to pyruvate reaction
0
5
0.00
0.00
0.0
1.8
—
259.8
—
0
5
(40758558) Short blood count panel - Blood
0
8
0.00
0.00
0.0
16.3
—
—
—
0
0
(40761536) Microorganisms panel - Urine sediment
0
7
0.00
0.00
0.0
3.4
—
—
—
0
0
Mortality – FinRegistry
↥Association
Association between endpoint AB1_PARACOCCIDIOIDOMYCOSIS and mortality.
Females
No dataMales
No dataMortality risk
Mortality risk for people of age
years, who have AB1_PARACOCCIDIOIDOMYCOSIS.| N-year risk | Females | Males |
|---|---|---|
| 1 | No data | No data |
| 5 | No data | No data |
| 10 | No data | No data |
| 15 | No data | No data |
| 20 | No data | No data |
Relationships between endpoints
↥Index endpoint: AB1_PARACOCCIDIOIDOMYCOSIS – Paracoccidioidomycosis
GWS hits: -
Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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