This is a non-core endpoint: only basic statistics are computed.
See these related core endpoints for full statistics:
Plasmodium malariae malaria
AB1_MALARIA_MALARIAE
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
7 |
4. Check minimum number of eventsNone |
7 |
5. Include endpointsNone |
7 |
6. Filter based on genotype QC (FinnGen only) |
7 |
Control definitions (FinnGen only)
- Control exclude
- AB1_PROTOZOAL
Extra metadata
- Level in the ICD hierarchy
- 4
- First used in FinnGen datafreeze
- DF5
Similar endpoints
↥List of similar endpoints to
Plasmodium malariae malaria
based on the number of shared cases.
Similar with more cases:
- Malaria
- Protozoal diseases
- First line medication for Crohn's disease
- Dorsopathies
- Certain infectious and parasitic diseases
Similar with less cases:
None
Case counts by codes
↥FinnGen case counts by registry codes:
Not enough data for upset plot.
Not enough data for upset table.
Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 83 | 29 | 52 |
| Only index persons | 76 | 27 | 49 |
| Unadjusted period prevalence (%) | |||
| Whole population | 0.00 | 0.00 | 0.00 |
| Only index persons | 0.00 | 0.00 | 0.00 |
| Median age at first event (years) | |||
| Whole population | 34.37 | 27.01 | 38.46 |
| Only index persons | 34.38 | 27.01 | 38.44 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 7 | - | - |
| Unadjusted period prevalence (%) | 0.00 | - | - |
| Median age at first event (years) | 47.50 | - | - |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
No data
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(1761868) Lipid panel - Serum or Plasma
0
30
0.00
1.41
0.0
3.0
—
—
—
0
0
(3018006) Microscopic observation [Identifier] in Cervix by Cyto stain.thin prep
0
11
0.00
0.23
0.0
1.2
—
—
—
0
0
(40764999) Glomerular filtration rate/1.73 sq M.predicted [Volume Rate/Area] in Serum, Plasma or Blood by Creatinine-based formula (CKD-EPI)
7
59
+∞
0.23
35.6
13.4
ml/min/173m2
74.6
83.4
—
7
48
(3033319) Streptococcus pyogenes Ag [Presence] in Throat
0
10
0.00
0.23
0.0
1.4
—
—
—
0
0
(3009201) Thyrotropin [Units/volume] in Serum or Plasma
7
57
+∞
0.23
7.6
4.7
mu/l
2.3
1.9
—
7
52
(21494755) Public health laboratory ask at order entry panel
0
8
0.00
0.00
0.0
1.5
—
—
—
0
0
(40761511) CBC panel - Blood by Automated count
7
64
+∞
0.00
30.1
13.2
—
—
—
0
0
(3002109) Cholesterol in LDL/Cholesterol in HDL [Mass Ratio] in Serum or Plasma
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
(3008152) Bicarbonate [Moles/volume] in Arterial blood
0
5
0.00
0.00
0.0
2.8
—
26.5
—
0
5
(3004716) Salmonella sp identified in Stool by Organism specific culture
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
(3002173) Hemoglobin [Mass/volume] in Arterial blood
0
6
0.00
0.00
0.0
2.7
—
119.2
—
0
6
(3004248) Sex hormone binding globulin [Moles/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.0
—
52.2
—
0
5
(3016502) Oxygen saturation in Arterial blood
0
6
0.00
0.00
0.0
2.7
—
94.0
—
0
6
(3044491) Cholesterol non HDL [Mass/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
Mortality – FinRegistry
↥Association
Association between endpoint AB1_MALARIA_MALARIAE and mortality.
Females
No dataMales
No dataMortality risk
Mortality risk for people of age
years, who have AB1_MALARIA_MALARIAE.| N-year risk | Females | Males |
|---|---|---|
| 1 | No data | No data |
| 5 | No data | No data |
| 10 | No data | No data |
| 15 | No data | No data |
| 20 | No data | No data |
Relationships between endpoints
↥Index endpoint: AB1_MALARIA_MALARIAE – Plasmodium malariae malaria
GWS hits: -
Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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