Miliary tuberculosis

AB1TUBERCU_MILIARY

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 A19
  • Hospital discharge: ICD-9 01[8]
  • Hospital discharge: ICD-8 01[8]
  • Cause of death: ICD-10 A19
  • Cause of death: ICD-9 01[8]
  • Cause of death: ICD-8 01[8]

2 out of 7 registries used, show all original rules.

63

4. Check minimum number of events

None

63

5. Include endpoints

None

63

6. Filter based on genotype QC (FinnGen only)

63

Control definitions (FinnGen only)

Control exclude
AB1_TUBERCULOSIS

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1151 536 575
Only index persons 525 252 273
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.02
Only index persons 0.01 0.01 0.01
Median age at first event (years)
Whole population 69.91 73.54 66.67
Only index persons 65.62 67.62 63.77

-FinnGen-

Key figures

All Female Male
Number of individuals 63 24 39
Unadjusted period prevalence (%) 0.01 0.01 0.02
Median age at first event (years) 69.28 66.71 70.87

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
51
Matched controls
508
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
A19.1
ICD-10 Finland
Acute miliary tuberculosis of multiple sites
+∞
18.9
17
*
A19.9
ICD-10 Finland
Miliary tuberculosis, unspecified
+∞
15.4
14
*
A19.0
ICD-10 Finland
Acute miliary tuberculosis of a single specified site
+∞
11.9
11
*
R50.9
ICD-10 Finland
Fever, unspecified
7.8
7.8
19
36
A19.2
ICD-10 Finland
Acute miliary tuberculosis, unspecified
+∞
7.5
7
*
A19.8
ICD-10 Finland
Other miliary tuberculosis
+∞
7.5
7
*
A15.0
ICD-10 Finland
Tuberculosis of lung, confirmed by sputum microscopy with or without culture
+∞
6.4
6
*

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3014162) Mycobacterium tuberculosis DNA [Presence] in Specimen by NAA with probe detection
16
13
16.16
16.68
7.9
2.4
—
—
—
0
0
(3015479) Mycobacterium sp identified in Blood by Organism specific culture
12
0
+∞
12.94
1.9
0.0
—
—
—
0
0
(46235355) HIV 1 and 2 tests - Meaningful Use set
23
46
7.30
12.10
1.2
1.8
—
—
—
0
0
(40769539) Bacteria identified based on 16S rRNA gene [Identifier] in Specimen by Sequencing
10
6
19.42
7.00
1.2
1.0
—
—
—
0
0
(3019284) Hepatitis B virus surface Ag [Presence] in Serum
16
43
4.65
5.80
1.0
1.6
—
—
—
0
0
(3012095) Magnesium [Moles/volume] in Serum or Plasma
21
72
3.88
5.52
2.6
2.4
mmol/l
0.8
0.8
0.04
21
63
(3009445) Proteinase 3 Ab [Units/volume] in Serum
11
22
5.85
5.49
1.7
1.0
—
—
—
0
0
(3003458) Phosphate [Moles/volume] in Serum or Plasma
20
70
3.72
5.06
6.6
6.8
mmol/l
1.0
1.1
1.53
20
61
(3023368) Bacteria identified in Blood by Culture
33
166
3.07
4.59
6.2
4.2
—
—
—
0
0
(3005702) Mycobacterium sp identified in Specimen by Organism specific culture
9
12
8.53
4.53
3.0
1.2
—
—
—
0
0
(3021879) Hepatitis B virus core Ab [Presence] in Serum
12
31
4.55
4.49
1.4
1.2
—
—
—
0
0
(3002434) Lupus erythematosus deoxynucleoproteins IgG Ab [Units/volume] in Serum by Immunoassay
8
10
8.96
4.20
1.1
1.1
—
—
—
0
0
(3017143) Hepatitis C virus Ab [Presence] in Serum
13
38
4.05
4.16
1.5
1.4
—
—
—
0
0
(3022313) Gas panel - Capillary blood
10
24
4.76
4.05
6.8
3.7
—
—
—
0
0
(36305247) Microscopic observation [Identifier] in Isolate by Gram stain
8
11
8.13
3.99
1.4
1.0
—
—
—
0
0
(3007164) IgA [Mass/volume] in Serum or Plasma
18
70
3.20
3.79
1.7
1.5
g/l
4.2
3.9
—
10
42
(3023024) Carbon dioxide [Partial pressure] in Capillary blood
12
36
3.88
3.69
6.9
3.4
kpa
5.2
5.0
0.30
12
31
(36031861) Influenza virus A and B and SARS-CoV-2 (COVID-19) and Respiratory syncytial virus RNA panel - Respiratory system specimen by NAA with probe detection
11
32
3.95
3.51
1.6
1.8
—
—
—
0
0
(3049804) Myeloperoxidase IgG Ab [Units/volume] in Serum
8
15
5.94
3.31
1.9
1.0
—
—
—
0
0
(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection
20
90
2.79
3.23
2.2
1.9
—
—
—
0
0
(3022096) Basophils/100 leukocytes in Blood
33
193
2.49
3.12
16.9
5.9
%
0.6
0.6
0.36
33
169
(42870588) Differential panel, method unspecified - Blood
28
153
2.49
3.05
18.9
5.4
—
—
—
0
0
(3004588) Protein electrophoresis panel - Serum or Plasma
13
47
3.23
3.03
1.5
1.2
—
—
—
0
0
(3006504) Eosinophils/100 leukocytes in Blood
33
196
2.44
2.99
16.8
5.9
%
2.7
2.5
0.22
33
173
(3019069) Monocytes/100 leukocytes in Blood
33
197
2.42
2.94
17.0
6.2
%
9.2
9.0
0.14
33
176
(3008757) Leukocyte morphology finding [Identifier] in Blood
6
9
7.22
2.93
2.3
5.1
—
—
—
0
0
(3042194) Human metapneumovirus RNA [Presence] in Specimen by NAA with probe detection
6
9
7.22
2.93
1.5
1.1
—
—
—
0
0
(3002030) Lymphocytes/100 leukocytes in Blood
33
200
2.37
2.81
16.9
6.0
%
22.5
24.3
0.47
33
178
(586526) SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection
10
32
3.53
2.78
1.6
1.3
—
—
—
0
0
(3049717) Cytology report of Urine Cyto stain
9
25
4.02
2.69
5.4
2.8
—
—
—
0
0
(3023520) Reticulocytes [#/volume] in Blood
14
57
2.87
2.67
2.5
3.4
e9/l
68.7
68.2
—
9
47
(46235759) Influenza virus B RNA [Presence] in Nasopharynx by NAA with probe detection
9
26
3.86
2.60
3.1
1.9
—
—
—
0
0
(3018010) Neutrophils/100 leukocytes in Blood
32
197
2.27
2.57
15.2
5.5
%
62.6
59.7
0.72
32
174
(46237023) Hepatitis B virus core and surface Ab and surface Ag panel - Serum
6
12
5.40
2.46
1.2
1.1
—
—
—
0
0
(3016431) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Serum or Plasma
37
247
2.21
2.39
8.9
6.2
mmol/l
1.2
1.2
0.37
30
196
(3040853) Adenovirus DNA [Identifier] in Specimen by NAA with probe detection
5
9
5.92
2.25
1.6
1.1
—
—
—
0
0
(40761535) Cells panel - Urine sediment
11
43
2.89
2.23
7.0
4.0
—
—
—
0
0
(3051552) Clostridioides difficile toxin genes [Presence] in Stool by NAA with probe detection
10
38
2.94
2.12
1.2
1.6
—
—
—
0
0
(3050238) Crystals [Presence] in Synovial fluid by Light microscopy
5
10
5.32
2.11
2.0
1.0
—
—
—
0
0
(3018418) pH of Serum or Plasma
25
151
2.09
2.01
6.0
4.2
ph
7.4
7.4
—
5
31
(3042936) Bacteria identified in Isolate by Culture
15
74
2.35
1.94
2.1
2.0
—
—
—
0
0
(46236098) ABO and Rh group [Type] in Blood by Confirmatory method
20
112
2.15
1.94
2.4
1.9
—
—
—
0
0
(3006140) Bilirubin.total [Moles/volume] in Serum or Plasma
37
261
2.01
1.92
11.3
5.4
umol/l
9.1
12.1
2.31
37
245
(3011397) Hemoglobin [Presence] in Urine by Test strip
18
101
2.10
1.72
8.4
4.3
—
—
—
0
0
(3029287) Urinalysis microscopic panel [#/volume] - Urine by Automated count
28
185
1.92
1.70
10.5
3.4
—
—
—
0
0
(3037756) Immunofixation for Serum or Plasma
6
19
3.38
1.70
1.3
1.1
—
—
—
0
0
(40768443) Skin Pathology biopsy report
6
19
3.38
1.70
1.7
1.3
—
—
—
0
0
(3019832) Treponema pallidum Ab [Presence] in Serum
5
14
3.78
1.65
1.0
1.8
—
—
—
0
0
(40760888) Immunoglobulin light chains.free panel - Serum
5
14
3.78
1.65
2.2
2.1
—
—
—
0
0
(3042111) Morphology [Interpretation] in Bone marrow Narrative
5
14
3.78
1.65
1.0
1.6
—
—
—
0
0
(3044254) Respiratory syncytial virus RNA [Presence] in Specimen by NAA with probe detection
7
26
2.90
1.63
2.4
1.7
—
—
—
0
0
(4035726)
10
44
2.51
1.63
1.6
1.4
—
—
—
0
0
(3026008) Bacteria identified in Urine by Culture
26
170
1.90
1.62
6.8
3.2
—
—
—
0
0
(3037467) Urinalysis macro (dipstick) panel - Urine
42
323
1.90
1.56
9.0
5.0
—
—
—
0
0
(3043723) Beta 1 globulin [Mass/volume] in Serum or Plasma by Electrophoresis
7
28
2.68
1.50
1.4
1.1
—
—
—
0
0
(3000991) Gas panel - Venous blood
10
46
2.40
1.49
11.2
8.1
—
—
—
0
0
(3019225) pH of Specimen
10
47
2.34
1.42
6.0
3.3
—
—
—
0
0
(3024135) Streptococcus.beta-hemolytic [Presence] in Throat by Organism specific culture
9
42
2.33
1.40
1.1
1.4
—
—
—
0
0
(3012544) pH of Venous blood
11
56
2.17
1.31
5.9
5.9
—
—
—
0
0
(3000494) Fungus identified in Specimen by Culture
10
49
2.24
1.30
3.3
1.4
—
—
—
0
0
(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection
11
57
2.13
1.26
1.6
2.0
—
—
—
0
0
(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection
11
57
2.13
1.26
1.6
1.9
—
—
—
0
0
(3025941) Bacteria identified in Stool by Culture
5
19
2.77
1.24
1.8
1.2
—
—
—
0
0
(40762366) Oxygen capacity [Volume Fraction] in Arterial blood
6
26
2.44
1.21
12.7
7.1
—
—
—
0
0
(3032080) INR in Blood by Coagulation assay
29
216
1.63
1.07
8.4
12.7
inr
1.3
1.4
0.18
11
64
(40768804) Tissue Pathology biopsy report
24
171
1.65
1.05
2.2
2.3
—
—
—
0
0
(3016502) Oxygen saturation in Arterial blood
10
54
2.01
1.03
8.7
5.7
%
95.0
94.6
—
10
54
(40758558) Short blood count panel - Blood
17
111
1.73
1.01
8.5
6.4
—
—
—
0
0
(3016251) Hemoglobin.gastrointestinal [Presence] in Stool
6
28
2.26
0.94
2.2
2.7
—
—
—
0
0
(36304419) Bacteria [Presence] in Urine
19
131
1.64
0.93
10.8
3.3
—
—
—
0
0
(43054903) Holo-transcobalamin II [Moles/volume] in Serum
26
195
1.57
0.90
2.6
2.1
pmol/l
87.5
82.5
0.19
18
88
(3015736) pH of Urine
24
178
1.56
0.87
7.5
4.7
—
—
—
0
0
(3044640) Blood type and Crossmatch panel - Blood
22
161
1.56
0.84
2.7
2.1
—
—
—
0
0
(3035350) Ketones [Presence] in Urine by Test strip
29
228
1.50
0.80
7.9
4.5
estimate
0.0
0.0
—
6
46
(3021601) Nitrite [Presence] in Urine by Test strip
29
229
1.49
0.78
10.4
5.9
estimate
0.0
0.0
—
6
45
(3001784) Prostate Specific Ag Free/Prostate specific Ag.total in Serum or Plasma
11
165
0.60
0.76
3.3
4.9
%
20.6
21.4
—
6
87
(706163) SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection
25
194
1.48
0.72
1.9
2.7
—
—
—
0
0
(3009261) Glucose [Presence] in Urine by Test strip
29
233
1.45
0.69
7.9
4.5
estimate
0.0
0.0
—
7
45
(1761868) Lipid panel - Serum or Plasma
8
121
0.61
0.62
1.9
4.0
—
—
—
0
0
(3027238) Thyroperoxidase Ab [Units/volume] in Serum or Plasma
0
19
0.00
0.61
0.0
1.2
—
44.7
—
0
7
(1761482) Bacteria [#/volume] in Urine by Culture
0
21
0.00
0.61
0.0
6.2
—
—
—
0
0
(3003785) Carcinoembryonic Ag [Mass/volume] in Serum or Plasma
8
54
1.55
0.60
1.5
3.4
ug/l
2.4
6.2
—
8
45
(3014007) Fractional oxyhemoglobin in Arterial blood
6
37
1.69
0.57
10.8
6.4
%
93.8
92.9
—
6
37
(40760892) CBC W Ordered Manual Differential panel - Blood
12
83
1.55
0.57
12.9
5.5
—
—
—
0
0
(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture
9
62
1.53
0.56
5.0
3.2
—
—
—
0
0
(3006217) Methemoglobin/Hemoglobin.total in Arterial blood
6
38
1.64
0.56
10.8
6.2
%
0.6
0.7
—
6
38
(3028653) Carboxyhemoglobin/Hemoglobin.total in Arterial blood
6
39
1.59
0.54
10.8
5.4
%
1.0
1.5
—
6
39
(3002256) Pathology report gross observation
7
46
1.59
0.50
1.6
1.4
—
—
—
0
0
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
26
216
1.35
0.48
4.1
4.0
—
—
—
0
0
(3029937) Albumin [Presence] in Urine by Test strip
18
141
1.39
0.47
8.6
4.7
estimate
0.0
0.0
—
5
44
(3002173) Hemoglobin [Mass/volume] in Arterial blood
7
50
1.45
0.47
11.0
6.0
g/l
92.9
118.3
—
7
50
(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma
36
403
0.75
0.46
4.5
4.8
mmol/l
1.5
1.4
0.26
31
350
(3007853) Bacteria identified in Skin by Aerobe culture
8
57
1.46
0.44
1.6
1.8
—
—
—
0
0
(43534045) MCM6 gene c.-13910C>T and -13915T>G [Identifier] in Blood or Tissue by Molecular genetics method Nominal
0
17
0.00
0.41
0.0
1.1
—
—
—
0
0
(21494755) Public health laboratory ask at order entry panel
0
17
0.00
0.41
0.0
1.5
—
—
—
0
0
(3052851) Hemolysis interference index of Serum or Plasma
0
17
0.00
0.41
0.0
3.3
—
—
—
0
0
(3013139) Helicobacter pylori Ag [Presence] in Stool
0
18
0.00
0.40
0.0
1.4
—
—
—
0
0
(3021589) Normoblasts [#/volume] in Blood
24
203
1.29
0.38
24.4
10.1
e9/l
0.0
0.0
1.15
24
164
(3023103) Potassium [Moles/volume] in Serum or Plasma
41
446
0.77
0.37
48.1
21.6
mmol/l
4.0
4.0
0.20
41
425
(3019060) Gas panel - Arterial blood
6
42
1.47
0.37
3.5
3.5
—
—
—
0
0
(40761536) Microorganisms panel - Urine sediment
6
43
1.44
0.36
7.7
4.0
—
—
—
0
0
(3019550) Sodium [Moles/volume] in Serum or Plasma
41
445
0.77
0.36
47.5
21.6
mmol/l
139.1
139.6
0.50
41
424
(3019900) Cholesterol [Moles/volume] in Serum or Plasma
37
405
0.79
0.34
4.5
4.7
mmol/l
4.3
4.3
0.04
31
356
(3001308) Cholesterol in LDL [Moles/volume] in Serum or Plasma
38
414
0.79
0.33
4.7
5.4
mmol/l
2.3
2.5
0.43
32
362
(3008486) Thyroxine (T4) free [Moles/volume] in Serum or Plasma
34
306
1.24
0.31
3.2
3.9
pmol/l
15.3
15.1
0.16
27
259
(40761511) CBC panel - Blood by Automated count
41
441
0.80
0.30
32.7
17.9
—
—
—
0
0
(3009542) Hematocrit [Volume Fraction] of Blood
38
352
1.20
0.23
36.7
19.6
%
37.0
38.7
0.65
21
202
(37019628) Gastrointestinal bacterial pathogens panel - Stool by NAA with probe detection
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
(3029511) Human papilloma virus DNA [Presence] in Specimen by NAA with probe detection
0
10
0.00
0.21
0.0
1.6
—
—
—
0
0
(3006588) Cancer Ag 15-3 [Units/volume] in Serum or Plasma
0
10
0.00
0.21
0.0
3.0
—
19.3
—
0
10
(3035285) Chloride [Moles/volume] in Venous blood
0
12
0.00
0.21
0.0
3.4
—
105.6
—
0
12
(3033705) Calcium.ionized [Moles/volume] in Venous blood
0
12
0.00
0.21
0.0
3.4
—
—
—
0
0
(3041354) Potassium [Moles/volume] in Venous blood
0
12
0.00
0.21
0.0
3.4
—
4.1
—
0
12
(3022145) Colonoscopy Study observation
6
48
1.28
0.21
1.0
1.3
—
—
—
0
0
(3033319) Streptococcus pyogenes Ag [Presence] in Throat
0
14
0.00
0.20
0.0
1.3
—
—
—
0
0
(3003338) MCHC [Mass/volume]
29
315
0.85
0.19
50.3
25.8
g/l
327.0
330.4
0.92
29
310
(40768797) Stomach Pathology biopsy report
7
62
1.14
0.18
1.4
1.3
—
—
—
0
0
(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting
37
391
0.87
0.15
3.8
4.3
mmol/l
1.4
1.2
0.53
31
337
(3003694) ABO and Rh group [Type] in Blood
9
105
0.83
0.14
1.3
1.3
—
—
—
0
0
(3020564) Creatinine [Moles/volume] in Serum or Plasma
42
437
0.88
0.12
45.5
21.6
umol/l
96.2
90.3
0.31
42
437
(3011960) Natriuretic peptide B [Mass/volume] in Serum or Plasma
5
45
1.12
0.10
2.8
3.1
ng/l
191.8
230.1
—
5
39
(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma
7
63
1.12
0.08
14.1
9.1
—
—
—
0
0
(3044889) 12 lead EKG panel
28
294
0.91
0.08
5.9
4.4
—
—
—
0
0
(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip
20
187
1.10
0.07
8.2
4.8
—
—
—
0
0
(3020059) Calcium [Moles/volume] corrected for albumin in Serum or Plasma
11
100
1.12
0.05
2.0
2.8
mmol/l
2.5
2.5
0.40
11
86
(3013512) EKG study
16
152
1.07
0.02
4.7
5.2
—
—
—
0
0
(3041096) Erythrocytes [Presence] in Urine by Automated
13
137
0.94
0.02
6.0
4.2
—
—
—
0
0
(3009201) Thyrotropin [Units/volume] in Serum or Plasma
37
376
0.96
0.00
4.0
4.8
mu/l
2.0
2.1
0.13
32
317
(3018251) Fasting glucose [Moles/volume] in Serum or Plasma
40
403
0.98
0.00
5.0
5.4
mmol/l
6.1
6.2
0.23
35
347
(3014702) Chromogranin A [Moles/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
5.2
—
4.5
—
0
6
(1002224) Polysomnography panel
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(21492888) Glucose tolerance 2 hours gestational panel - Serum or Plasma
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
(36033641) SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Rapid immunoassay
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(3003327) Ova and parasites identified in Stool by Light microscopy
0
9
0.00
0.00
0.0
1.7
—
—
—
0
0
(3016038) Potassium [Moles/volume] in Urine
0
5
0.00
0.00
0.0
1.0
—
52.5
—
0
5
(3027545) Mycoplasma pneumoniae Ab [Presence] in Serum by Immunoassay
0
7
0.00
0.00
0.0
1.7
—
—
—
0
0
(3015916) Alpha-1-Fetoprotein [Units/volume] in Serum or Plasma
0
8
0.00
0.00
0.0
2.0
—
2.3
—
0
8
(3026389) Candida sp identified in Specimen by Organism specific culture
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3023511) Choriogonadotropin [Units/volume] in Urine
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3021197) Magnesium Ionized [Moles/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
(3010521) Mycoplasma pneumoniae IgM Ab [Presence] in Serum by Immunoassay
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3005570) Glucose [Moles/volume] in Urine
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(21493466) Plesiomonas shigelloides DNA [Presence] in Stool by NAA with non-probe detection
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(3039443) Prostate specific Ag panel - Serum or Plasma
0
9
0.00
0.00
0.0
1.8
—
—
—
0
0
(3008898) HLA-B27 [Presence]
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
(3012568) Campylobacter sp identified in Specimen by Organism specific culture
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(3043410) Blood group antigens tested for on Red Blood Cells
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(42868716) Shigella species+EIEC invasion plasmid antigen H ipaH gene [Presence] in Stool by NAA with probe detection
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(3024522) Salmonella sp identified in Specimen by Organism specific culture
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(3020148) Glutamate decarboxylase 65 Ab [Units/volume] in Serum
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3025468) Yersinia sp identified in Specimen by Organism specific culture
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(3005988) Vibrio sp identified in Specimen by Organism specific culture
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
(3051611) Lipemic interference index of Serum or Plasma
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3001019) Free T4 and TSH panel - Serum or Plasma
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3051651) Icteric interference index of Serum or Plasma
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint AB1TUBERCU_MILIARY and mortality.

Females

Parameter HR [95% CI] p-value
AB1TUBERCU_MILIARY 2.344 [1.68, 3.27] < 0.001
Birth year 0.994 [0.99, 1.0] 0.142

During the follow-up period (1.1.1998 — 31.12.2019), 106 out of 196 females with AB1TUBERCU_MILIARY died.

Males

Parameter HR [95% CI] p-value
AB1TUBERCU_MILIARY 3.085 [2.04, 4.67] < 0.001
Birth year 0.986 [0.98, 1.0] 0.004

During the follow-up period (1.1.1998 — 31.12.2019), 139 out of 241 males with AB1TUBERCU_MILIARY died.

Mortality risk

Mortality risk for people of age

years, who have AB1TUBERCU_MILIARY.

N-year risk Females Males
1 0.247% 0.503%
5 1.401% 3.278%
10 3.368% 8.075%
15 6.323% 14.981%
20 11.127% 24.438%

Relationships between endpoints

Index endpoint: AB1TUBERCU_MILIARY – Miliary tuberculosis

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data